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NECEvent2014_5_1_scaffold_2208_2

Organism: NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

near complete RP 46 / 55 MC: 4 BSCG 45 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: comp(916..1128)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase omega subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 140
  • Evalue 2.00e-31
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 140
  • Evalue 1.00e-30
DNA-directed RNA polymerase subunit omega n=30 Tax=Staphylococcus epidermidis RepID=D4FJP4_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 70.0
  • Bit_score: 140
  • Evalue 7.30e-31

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 213
ATGTTAAATCCACCGTTAAACCAACTTACTGCAAAAGTGAATTCAAAATATCTTATTGCCACTACGGCGGCTAAAAGAGCACGTGAATTAGATGAAAAACGCGAAACAGCGCTTTTAGATCAGTACCATTCAGCTAAACCTGTTGGAAAAGCTTTAGAAGAAATTGCTGATGGTAAAATAGAACCTGTTGTACCGAAAGAGTATTTAGGATAA
PROTEIN sequence
Length: 71
MLNPPLNQLTAKVNSKYLIATTAAKRARELDEKRETALLDQYHSAKPVGKALEEIADGKIEPVVPKEYLG*