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NECEvent2014_5_1_scaffold_2380_2

Organism: NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

near complete RP 46 / 55 MC: 4 BSCG 45 / 51 MC: 1 ASCG 13 / 38 MC: 1
Location: 1403..1978

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Staphylococcus epidermidis VCU125 RepID=H3W217_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 381
  • Evalue 3.90e-103
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 381
  • Evalue 1.10e-103
RNA polymerase sigma factor SigA {ECO:0000255|HAMAP-Rule:MF_00963}; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 381
  • Evalue 5.50e-103

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 576
ATGTCTGACAACCAAGTTAAAATTAAAAAGCAAACAATTGATCCGACTTTAACACTAGAAGATGTTAAAAAACAATTAATTGATAAAGGAAAAAAAGAAGGTCATTTAAGTCACGAAGAAATCGCTGAAAAACTGCAAAATTTTGAAATGGACTCAGATCAAATGGATGATTTCTTCGACCAATTGAATGACAATGACATTACACTTGTTAATGAAAAAGATAGTTCTGACACGGATGATAAAATCAATCCTAATGATTTGAGTGCCCCTCCTGGTGTCAAAATCAATGACCCAGTGCGTATGTATTTAAAGGAAATTGGTAGAGTTAATCTTTTAAGTGCTCAAGAAGAAATTGAGCTTGCAAAAAGAATTGAACAAGGTGATGAAATTGCTAAATCACGATTAGCTGAAGCAAACTTGCGTTTAGTTGTTAGTATTGCTAAACGATATGTTGGTCGTGGAATGTTATTCTTAGATTTGATTCAAGAAGGTAATATGGGCTTAATTAAAGCTGTGGAAAAGTTTGATTTTAGCAAAGGATTTAAATTTTCAACATATGCCACTTGGTGGATTAGA
PROTEIN sequence
Length: 192
MSDNQVKIKKQTIDPTLTLEDVKKQLIDKGKKEGHLSHEEIAEKLQNFEMDSDQMDDFFDQLNDNDITLVNEKDSSDTDDKINPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIELAKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKGFKFSTYATWWIR