ggKbase home page

NECEvent2014_5_1_Staphylococcus_epidermidis_33_6

NECEvent2014_5_1_Staphylococcus_epidermidis_32_6
In projects: NECEvent2014_5_1

Consensus taxonomy: Staphylococcus epidermidis  →  Staphylococcus  →  Bacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 618 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_1_scaffold_1175 175_007_scaffold_1175
Domain: Bacteria (50%)
4 3752 bp 48.67 38.50 14.31
NECEvent2014_5_1_scaffold_2120 175_007_scaffold_2120
Class: Bacilli (66.67%)
3 2192 bp 26.05 22.38 59.40
NECEvent2014_5_1_scaffold_3497 175_007_scaffold_3497
Species: Staphylococcus aureus (100%)
1 1404 bp 29.06 19.44 99.79
NECEvent2014_5_1_scaffold_1226 175_007_scaffold_1226
Genus: Staphylococcus (57.14%)
7 3572 bp 25.03 15.45 55.77
NECEvent2014_5_1_scaffold_4608 175_007_scaffold_4608
Species: Streptococcus tigurinus (66.67%)
3 1066 bp 27.58 15.06 61.35
NECEvent2014_5_1_scaffold_4260 175_007_scaffold_4260
Species: Staphylococcus epidermidis (100%)
1 1155 bp 27.53 14.68 71.17
NECEvent2014_5_1_scaffold_1008 175_007_scaffold_1008
Genus: Staphylococcus (100%)
5 4349 bp 29.57 14.52 70.91
NECEvent2014_5_1_scaffold_1572 175_007_scaffold_1572
Species: Staphylococcus aureus (50%)
2 2785 bp 28.73 13.84 88.44
NECEvent2014_5_1_scaffold_3797 175_007_scaffold_3797
Species: Staphylococcus epidermidis (100%)
2 1295 bp 27.03 11.70 44.25
NECEvent2014_5_1_scaffold_2618 175_007_scaffold_2618
Species: Staphylococcus epidermidis (100%)
1 1821 bp 39.87 10.21 51.24
NECEvent2014_5_1_scaffold_1094 175_007_scaffold_1094
Species: Staphylococcus epidermidis (75%)
4 4051 bp 29.87 9.33 78.13
NECEvent2014_5_1_scaffold_1979 175_007_scaffold_1979
Species: Staphylococcus epidermidis (83.33%)
6 2327 bp 29.14 9.28 67.04
NECEvent2014_5_1_scaffold_3176 175_007_scaffold_3176
Species: Staphylococcus epidermidis (100%)
1 1535 bp 34.72 9.19 77.39
NECEvent2014_5_1_scaffold_2039 175_007_scaffold_2039
Species: Staphylococcus epidermidis (100%)
2 2268 bp 32.54 9.13 90.61
NECEvent2014_5_1_scaffold_2326 175_007_scaffold_2326
Species: Staphylococcus epidermidis (100%)
3 2014 bp 33.52 8.71 94.29
NECEvent2014_5_1_scaffold_2871 175_007_scaffold_2871
Species: Staphylococcus sp. DORA_6_22 (100%)
2 1685 bp 29.67 8.64 82.97
NECEvent2014_5_1_scaffold_1186 175_007_scaffold_1186
Species: Staphylococcus epidermidis (100%)
6 3696 bp 27.08 8.56 53.57
NECEvent2014_5_1_scaffold_794 175_007_scaffold_794
Species: Staphylococcus epidermidis (80%)
5 5561 bp 32.62 8.50 82.11
NECEvent2014_5_1_scaffold_4903 175_007_scaffold_4903
Species: Staphylococcus epidermidis (100%)
1 1006 bp 29.32 8.50 99.90
NECEvent2014_5_1_scaffold_3884 175_007_scaffold_3884
Species: Staphylococcus sp. DORA_6_22 (100%)
1 1269 bp 26.56 8.39 70.21
NECEvent2014_5_1_scaffold_2906 175_007_scaffold_2906
Species: Staphylococcus epidermidis (60%)
5 1666 bp 31.45 8.19 72.03
NECEvent2014_5_1_scaffold_1791 175_007_scaffold_1791
Species: Staphylococcus epidermidis (66.67%)
3 2525 bp 31.01 8.08 88.51
NECEvent2014_5_1_scaffold_1446 175_007_scaffold_1446
Species: Staphylococcus epidermidis (100%)
4 3056 bp 31.81 8.05 78.73
NECEvent2014_5_1_scaffold_4451 175_007_scaffold_4451 3 1101 bp 39.15 8.04 61.40
NECEvent2014_5_1_scaffold_2259 175_007_scaffold_2259
Species: Staphylococcus epidermidis (66.67%)
3 2070 bp 31.45 7.68 74.06
NECEvent2014_5_1_scaffold_3292 175_007_scaffold_3292
Species: Staphylococcus sp. DORA_6_22 (50%)
2 1485 bp 31.92 7.68 98.99
NECEvent2014_5_1_scaffold_1697 175_007_scaffold_1697
Species: Staphylococcus epidermidis (100%)
2 2629 bp 32.03 7.59 65.16
NECEvent2014_5_1_scaffold_997 175_007_scaffold_997
Species: Staphylococcus epidermidis (60%)
5 4405 bp 32.35 7.59 84.31
NECEvent2014_5_1_scaffold_3899 175_007_scaffold_3899
Species: Staphylococcus epidermidis (100%)
1 1264 bp 33.31 7.59 87.58
NECEvent2014_5_1_scaffold_3159 175_007_scaffold_3159
Species: Staphylococcus epidermidis (100%)
1 1542 bp 29.57 7.59 80.93
NECEvent2014_5_1_scaffold_3752 175_007_scaffold_3752
Species: human gut metagenome (50%)
2 1309 bp 30.86 7.56 63.03
NECEvent2014_5_1_scaffold_3323 175_007_scaffold_3323
Species: Staphylococcus sp. DORA_6_22 (50%)
2 1471 bp 30.59 7.55 85.66
NECEvent2014_5_1_scaffold_1936 175_007_scaffold_1936
Species: Staphylococcus epidermidis (75%)
4 2368 bp 28.17 7.54 55.49
NECEvent2014_5_1_scaffold_1914 175_007_scaffold_1914
Species: Staphylococcus epidermidis (100%)
3 2390 bp 32.59 7.53 85.73
NECEvent2014_5_1_scaffold_3454 175_007_scaffold_3454
Species: Staphylococcus epidermidis (100%)
1 1417 bp 31.69 7.52 67.11
NECEvent2014_5_1_scaffold_1635 175_007_scaffold_1635
Species: Staphylococcus epidermidis (100%)
5 2716 bp 29.46 7.51 88.03
NECEvent2014_5_1_scaffold_1153 175_007_scaffold_1153
Species: Staphylococcus epidermidis (100%)
3 3816 bp 32.15 7.51 78.85
NECEvent2014_5_1_scaffold_1460 175_007_scaffold_1460
Species: Staphylococcus epidermidis (100%)
4 3020 bp 32.75 7.50 90.89
NECEvent2014_5_1_scaffold_2775 175_007_scaffold_2775
Species: Staphylococcus epidermidis (50%)
2 1730 bp 30.40 7.46 69.54
NECEvent2014_5_1_scaffold_1343 175_007_scaffold_1343
Species: Staphylococcus epidermidis (100%)
3 3281 bp 35.29 7.45 96.83
NECEvent2014_5_1_scaffold_2726 175_007_scaffold_2726
Species: Staphylococcus epidermidis (66.67%)
3 1758 bp 30.94 7.42 100.68
NECEvent2014_5_1_scaffold_3733 175_007_scaffold_3733
Species: Staphylococcus epidermidis (50%)
2 1318 bp 31.11 7.40 91.96
NECEvent2014_5_1_scaffold_1763 175_007_scaffold_1763
Species: Staphylococcus epidermidis (100%)
2 2554 bp 35.98 7.40 91.74
NECEvent2014_5_1_scaffold_3299 175_007_scaffold_3299
Species: Staphylococcus epidermidis (100%)
3 1481 bp 34.37 7.39 70.90
NECEvent2014_5_1_scaffold_1787 175_007_scaffold_1787
Species: Staphylococcus epidermidis (50%)
2 2527 bp 32.09 7.36 88.56
NECEvent2014_5_1_scaffold_3186 175_007_scaffold_3186
Species: Staphylococcus epidermidis (100%)
2 1531 bp 37.88 7.35 90.53
NECEvent2014_5_1_scaffold_2040 175_007_scaffold_2040
Species: Staphylococcus epidermidis (100%)
2 2268 bp 33.29 7.34 78.57
NECEvent2014_5_1_scaffold_925 175_007_scaffold_925
Species: Staphylococcus epidermidis (75%)
8 4809 bp 31.90 7.33 81.29
NECEvent2014_5_1_scaffold_1121 175_007_scaffold_1121
Species: human gut metagenome (50%)
4 3939 bp 35.39 7.31 97.03
NECEvent2014_5_1_scaffold_2776 175_007_scaffold_2776
Species: Staphylococcus epidermidis (100%)
2 1729 bp 36.67 7.29 92.48
Displaying items 1-50 of 618 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.