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NECEvent2014_5_1_scaffold_1436_2

Organism: NECEvent2014_5_1_Negativicoccus_succinicivorans_52_6_

near complete RP 49 / 55 MC: 2 BSCG 44 / 51 ASCG 13 / 38 MC: 2
Location: 1293..3080

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 55.5
  • Coverage: 605.0
  • Bit_score: 631
  • Evalue 1.90e-178
UPI0003D5E78E related cluster n=1 Tax=unknown RepID=UPI0003D5E78E similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 596.0
  • Bit_score: 1163
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta {ECO:0000313|EMBL:ETI87133.1}; Flags: Fragment;; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.; similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 596.0
  • Bit_score: 1163
  • Evalue 0.0

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1788
ATGCCGCACTTGCTCGATTTACAGCGAAATTCCTACCTGTGGTTTCAGGAAGAAGGACTGCGGGAAATTTTTGAAGATATTTCTCCGATTGAAAGCAACGAACGGGGCAATAATCAAGACGGTAAATTAAAACTTTATTTTGATGATTACAAATTCGGTGAACCGAAATATGATATCGCCGAATGCAAAGAGCGTGACGCGACGTTCGCCGCGCCGCTGCGCGTTAAAGTTCGTCTGGAAAATGCCGAAACGGGCGAGCTCGCCGAAACGGAAGTATTTATGGGCGACTTCCCGGTGATGACCGATACCGGTACGTTCGTCATCAACGGCGCGGAACGCGTCATCGTCAGTCAGTTGGTGCGTTCGCCGGGCGTATATTACAGCGGCACGATCGATCAGATGGGTAAGTCGCTGTTCAGCTCCACGGTGATTCCGAATCGCGGCGCCTGGATTGAACTCGAAAGCGACGCCAACGATATCGTGCACGTTCGCATCGACCGTAACCGCAAGTTGCCGGCGACGGTTCTCGTACGCGCGCTGGGCTTTGAAACGAACGATGAAATCATGGATCTTTTCGGTGACGATCCGCGCATCGCGGAGACGTTGAAAAAAGACCCGACGCGTTCGCAGGAAGAAGCGTTAATTGAAATATATAAGAAATTGCGTCCGGGCGAACCGCCGTCCATCGACAGCGCGACTTCGATGTTCAACAATCTGTTCTTCGATCCGCGCCGCTATGATTTGGCGCATATCGGACGTTATAAATTAGGTAAGAAATTAGGCTGGCAGGGCCGTCTGTTCGGTCAGACGTTAGCGCGCCCGTTGGTTCACCCGCACACGGGTAAAGTCGTTTTGCCCGAAGGCACCGTGATCGGCAACAAGGAACTGGAACAGATCGCGGCCTCCGAAATGTTTTCCGATGCCGGCTCCGACTGGGCGCGTCAGCTCGAAGGCAAGACGCTGGTGGATACTCTCGTGGATATCAATACCGGCGAAGTGCTTTTGGAAGAAGGCACGAAAGTCGGCAAGAAAGAGCTGAAAGCGATTAAAGACAGCGGCATGTTCAAACGCATGCCCGCTAATGACATCGAGGCCATTATTGAAGGCGTGTTGCCGGCGCGTCGTGTAGAAAAAACGCTCGCGCAGAAACGCATTCCGGGTCTGCAGGAAATCTATGTCCTGAAAGGGGAAGGCGAAAACCGTCAGGAAGTCAAAATCGTTTGCAATAACGTGAACCTTCCGGACACGTTGCGTACCGTTGAACCGGCGGACATGATCGCCAATATTTCCTATTTATTGAATTTAATGGAAGGCATCGGCCATGTCGATGATATCGACCACTTGGGGAACCGCCGCTTGCGTTGCGTCGGTGAACTGTTGCAGAACCAGTTCCGCATCGGTTTGACCCGCATGGAACGTGTCGTCAAAGAACGTATGGCGACGCAGGATATCGACAACCTGACGCCGCAGATGCTGATCAATATTCGTCCGGTCACAGCGGCGCTGAAAGAATTTTTCGGTTCGAGCCAATTGTCGCAGTTCATGGACCAGACGAACCCGCTGGCGGAACTGACGCACAAACGTCGTCTTTCCGCATTGGGACCGGGTGGACTTTCGCGAGAACGCGCGGGCTTTGAAGTTCGCGACGTGCACCATTCGCACTACGGCCGCATGTGTCCGATTGAAACGCCGGAAGGTCCGAACATCGGCTTGATTTCGTCCTTAGCGAACTTTGCGAAAGTCAATAAATACGGTTTGATTGAAACGCCGTATCGCGTGGTGAAACAT
PROTEIN sequence
Length: 596
MPHLLDLQRNSYLWFQEEGLREIFEDISPIESNERGNNQDGKLKLYFDDYKFGEPKYDIAECKERDATFAAPLRVKVRLENAETGELAETEVFMGDFPVMTDTGTFVINGAERVIVSQLVRSPGVYYSGTIDQMGKSLFSSTVIPNRGAWIELESDANDIVHVRIDRNRKLPATVLVRALGFETNDEIMDLFGDDPRIAETLKKDPTRSQEEALIEIYKKLRPGEPPSIDSATSMFNNLFFDPRRYDLAHIGRYKLGKKLGWQGRLFGQTLARPLVHPHTGKVVLPEGTVIGNKELEQIAASEMFSDAGSDWARQLEGKTLVDTLVDINTGEVLLEEGTKVGKKELKAIKDSGMFKRMPANDIEAIIEGVLPARRVEKTLAQKRIPGLQEIYVLKGEGENRQEVKIVCNNVNLPDTLRTVEPADMIANISYLLNLMEGIGHVDDIDHLGNRRLRCVGELLQNQFRIGLTRMERVVKERMATQDIDNLTPQMLINIRPVTAALKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLISSLANFAKVNKYGLIETPYRVVKH