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NECEvent2014_5_1_scaffold_3576_1

Organism: NECEvent2014_5_1_Negativicoccus_succinicivorans_52_6_

near complete RP 49 / 55 MC: 2 BSCG 44 / 51 ASCG 13 / 38 MC: 2
Location: comp(2..610)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 203.0
  • Bit_score: 408
  • Evalue 4.40e-111
UPI0003D5F06B related cluster n=1 Tax=unknown RepID=UPI0003D5F06B similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 203.0
  • Bit_score: 407
  • Evalue 7.00e-111
  • rbh
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 199.0
  • Bit_score: 191
  • Evalue 2.90e-46

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Taxonomy

Clostridiales bacterium S5-A11 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 609
ATGGCTGCACTGAGAAATATCCACATCACCGTCGCGTATGACGGCAGTCCCTTCGTCGGTTTTCAACGACAGCTGAACGGCATGGCGGTGCAGGAAGTGATCGAAGACGTGCTGCAACGCATCTTGGGACAGAAAACGACGCTGTACTTCGTGGCGCGTACCGATTCGGGCGTGCACGCGTGGGCGCAGGAATGCACGTTTTATACGACCGGCACGATTCCCGGCGAACGGTTCGCGTCCGCGATGAACGCGCTTTTACCGCCGGCCGTGCGCGTGCGAAAAAGCCGTGAAGTGCCGGAAGATTACAGCGTGCGTCGGCAAAATACGGGCAAGACCTATCTTTACCAGATTTTACGCGGCCGCGATGATGATCCGTTTCGTTATCGCTACGTCTGGCGGCTCGGGTACGCGCTTGACGTGGCGACCATGCGCGCGGCGGCGCAAGTAGTATGCGGCACGCATGATTTTACGGCGTATCGCGGCAATAATTCCGTGCCGAGCAATCCGGTGCGTACGATTTACGATATTCATCTCGAGGAAGCGGGCGACCTGCTGAAAATTTACGTGACGGGCGACGGTTTCCTGTACAAAATGGTGCGCAATATTGTC
PROTEIN sequence
Length: 203
MAALRNIHITVAYDGSPFVGFQRQLNGMAVQEVIEDVLQRILGQKTTLYFVARTDSGVHAWAQECTFYTTGTIPGERFASAMNALLPPAVRVRKSREVPEDYSVRRQNTGKTYLYQILRGRDDDPFRYRYVWRLGYALDVATMRAAAQVVCGTHDFTAYRGNNSVPSNPVRTIYDIHLEEAGDLLKIYVTGDGFLYKMVRNIV