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NECEvent2014_5_1_scaffold_1148_2

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 743..1708

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02129}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_02129};; Short=L-CDH {ECO:0000256|HAMAP-Rule:MF_02129};; EC=1.1.1.108 {ECO:0000256|HAMAP-Rule:MF_02129 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 321.0
  • Bit_score: 639
  • Evalue 2.40e-180
L-carnitine dehydrogenase n=84 Tax=Pseudomonas RepID=LCDH_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 321.0
  • Bit_score: 639
  • Evalue 1.70e-180
  • rbh
3-hydroxybutyryl-CoA dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 321.0
  • Bit_score: 639
  • Evalue 4.90e-181

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 966
ATGTCCTTCGTCACCGAGATCAAGACCTTCGCCGCCCTCGGTAGCGGCGTCATCGGCAGCGGCTGGATCGCCCGCGCCCTGGCCCACGGCCTCGACGTCGTCGCCTGGGATCCGGCGCCGGGCGCCGAAGCGGCGTTGCGCGCGCGCGTCGCCAATGCCTGGCCGGCCTTGCGGAAACAGGGCCTGGCGCCCGGCGCGGCGCAGGAGCGCCTGCGCTTCGTCGCGAGCATCGAGGAATGCGTGGGCGACGCCGATTTCATCCAGGAGAGCGCCCCCGAGCGGCTCGACCTGAAGCTCGACCTGCACGCCAGGATCAGCGCCGCGGCGCGGCCCGACGTGCTGATCGGTTCCTCCACCTCGGGCCTGCTGCCCAGCGAGTTCTACGCCGAGGCGAGCCACCCCGAGCGCTGCCTGGTCGGCCACCCGTTCAACCCGGTCTACCTGCTGCCGCTGGTGGAGGTGGTCGGCGGCGAACGCACCGCTGCCGAGGCCGTGCGGGCGGCGATGCGGGTCTACGAATCGCTGGGCATGCGTCCGCTGCACGTACGCAAGGAAGTGCCCGGCTTCATCGCCGACCGCTTGCTCGAGGCGCTCTGGCGCGAGGCGCTGCACCTGGTCAACGACGGCGTGGCCACGACCGGCGAGATCGACGATGCGATCCGCTTCGGCGCCGGCCTGCGCTGGTCGTTCATGGGCACCTTCCTGACCTACACCCTGGCCGGTGGCAACGCCGGCATGCGCCACTTCATGGCGCAGTTCGGCCCGGCGCTGCAATTGCCCTGGACCTACCTGCCGGCGCCGGAACTCACCGAAGCCCTGATCGACCGGGTGGTGGAGGGCACCGCCGAGCAGCAGGGCGCACGCAGCATCGCCGAGCTCGAGCGCTACCGCGACGACTGCCTGCTGGCGGTGCTCGGGGCGATCAGGGAAACCAAGGCCCGGCACGGCTTCGCCTTCGCCGAGTGA
PROTEIN sequence
Length: 322
MSFVTEIKTFAALGSGVIGSGWIARALAHGLDVVAWDPAPGAEAALRARVANAWPALRKQGLAPGAAQERLRFVASIEECVGDADFIQESAPERLDLKLDLHARISAAARPDVLIGSSTSGLLPSEFYAEASHPERCLVGHPFNPVYLLPLVEVVGGERTAAEAVRAAMRVYESLGMRPLHVRKEVPGFIADRLLEALWREALHLVNDGVATTGEIDDAIRFGAGLRWSFMGTFLTYTLAGGNAGMRHFMAQFGPALQLPWTYLPAPELTEALIDRVVEGTAEQQGARSIAELERYRDDCLLAVLGAIRETKARHGFAFAE*