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NECEvent2014_5_1_scaffold_1486_4

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 1721..2968

Top 3 Functional Annotations

Value Algorithm Source
Basic amino acid%2C basic peptide and imipenem outer membrane porin OprD {ECO:0000313|EMBL:CKH97439.1}; EC=3.4.21.- {ECO:0000313|EMBL:CKH97439.1};; OprD {ECO:0000313|EMBL:AHY39261.1}; Outer membrane p similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 848
  • Evalue 4.50e-243
Porin D n=1 Tax=Pseudomonas aeruginosa BWHPSA028 RepID=U8M8S5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 848
  • Evalue 3.20e-243
  • rbh
Outer membrane porin, OprD family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 848
  • Evalue 9.00e-244

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1248
ATGAAAGTGATGAAGTGGAGCGCCATTGCACTGGCGGTTTCCGCAGGTAGCACTCAGTTCGCCGTGGCCGACGCATTCGTCAGCGATCAGGCCGAAGCGAAGGGGTTCATCGAAGACAGCAGCCTGAACCTGCTGCTCCGCAACTACTATTTCAACCGTGACGGCAAGGAAGGTCGGGGTGATCGCGTCGATTGGACCCAGGGCTTCCTCACCACCTACGAATCCGGCTTCACTCAAGGCACCGTGGGCTTCGGCGTCGATGCCTTCGGCTACCTGGGCCTGAAGCTCGACGGCACCTCCGACAAGACCGGCACCGGCAACCTGCCGGTGATGAACGACGGCAAGCCGCGCGATGACTACAGCCGCGCCGGCGGCGCCGTGAAGGTGCGCATCTCCAAGACCATGCTGAAGTGGGGCGAGATGCAACCGACCGCCCCGGTCTTCGCCGCTGGCGGCAGCCGCCTGTTCCCGCAGACCGCGACCGGCTTCCAGCTGCAGAGCAGCGAATTCGAAGGGCTCGACCTCGAGGCAGGCCACTTCACCGAGGGCAAGGAGCCGACCACCGTCAAATCGCGCGGTGAACTCTACGCCACCTACGCCGGCCAGACAGCCAAGAGCGCCGACTTCGCTGGCGGCCGCTACGCGATCACCGACAACCTCAGCGCCTCCCTCTATGGCGCAGAGCTGAAAGACATCTATCGCCAGTACTACCTGAACACCAACTACACCATCCCGCTGGCCTCCGATCAATCGCTGGGCTTCGACTTCAACATCTACCGCACCACCGACGAAGGCAAGTCCAAGGCTGGCGACATCAGCAACACCACCTGGTCCCTGGCGGGCGCGTATACCCTGGACGCCCACACCTTCACCCTGGCCTACCAGCAGGTGCATGGCGACGAGCCGTTCGACTACATCGGCTTCGGCGGCAACGGTTCCGGCGCCGGCGGCGACTCGATCTTCCTCGCCAACTCCGTCCAGTACTCCGACTTCAACGGTCCTGGCGAGAAATCCTGGCAGGCCCGCTACGACCTGAACCTGGCCTCCTACGGCGTTCCTGGCCTGACCTTCATGCTGCGTTACATCAATGGTAAGGACATCGACGGTACCAAGGTCGATTCCAGCTCCTCCTATGCAGGCCTGTACGGCGAGGATGGCAAGCACCACGAAACCAACCTCGAAGCCAAGTACGTGGTCCAGTCCGGTCCGGCCAAGGACCTGTCGTTCCGCATCCGCCAGGCCTGGCAC
PROTEIN sequence
Length: 416
MKVMKWSAIALAVSAGSTQFAVADAFVSDQAEAKGFIEDSSLNLLLRNYYFNRDGKEGRGDRVDWTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGTSDKTGTGNLPVMNDGKPRDDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGFQLQSSEFEGLDLEAGHFTEGKEPTTVKSRGELYATYAGQTAKSADFAGGRYAITDNLSASLYGAELKDIYRQYYLNTNYTIPLASDQSLGFDFNIYRTTDEGKSKAGDISNTTWSLAGAYTLDAHTFTLAYQQVHGDEPFDYIGFGGNGSGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMLRYINGKDIDGTKVDSSSSYAGLYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWH