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NECEvent2014_5_1_scaffold_1528_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(1112..2575)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase {ECO:0000313|EMBL:CDR93367.1}; EC=2.7.7.49 {ECO:0000313|EMBL:CDR93367.1};; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 487.0
  • Bit_score: 980
  • Evalue 1.20e-282
RNA-directed DNA polymerase (EC:2.7.7.49) similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 487.0
  • Bit_score: 978
  • Evalue 8.80e-283
K00986 RNA-directed DNA polymerase n=1 Tax=Pseudomonas pseudoalcaligenes CECT 5344 RepID=I7IFT1_PSEPS similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 487.0
  • Bit_score: 978
  • Evalue 3.10e-282
  • rbh

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Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1464
ATGAAAACGCAACCAGCAACACCGGTCGCGTCTGCGCCCTCCGGCGGAGTGATGAATTGGCACGATCTTGATTGGGCCACCATTCAGCAAGCCGTTCGGAAAACGCAGCTAAAGATTGCGCAGGCAACACAGGAAGGTAACTGGCGCAGGGTTAAACGCCTGCAACGGATGCTGACCTATTCGTTTTACGGCCGCTGTTTGGCTGTACGACGAGTCACGGAGAACCGGGGTCGTAAGACTCCGGGCGTCGATGGAGAAACCTGGGGATCGCCCCAGGCCAAGCTCCGTGCTGTGGGAAGTCTGTCGAAACAACGGGGTTATCGGCCCAAACCGCTACGGCGGGTCTGGATACCGAAACCCGGCAAGCTGGAGGAGCGCCCGCTGGGTATCCCGACGATGCTGGATCGGGCCATGCAGGCGCTGCATCTGCAAGCGTTGGAGCCTGTAATCGAAAGCACCAGCGATCCGAAGTCCTATGGATTTCGCCCGGATCGTTCGACTGCTGACGCAATGGTTGAGCTTTTCCACCTGCTGTCGCCGCAAACGGCGCCGGTCTGGATTCTGGAAGGCGACATCAAGGGCTTCTTCGACAACATCAACCACGACTGGTTGTGTCGGAATGTCTCGATGGACACGAAGGTACTGCGCAAGTGGTTAAAAGCCGGGGTTATCGACCGGCGACAACTCATGGCAACGGAAGCCGGGACGCCGCAGGGTGGAATTATTTCGCCCTGCCTGGCCAATGCCACTCTGAACGGTCTGGAAACTCAGCTGAAACGTCATTTGGCGAAGAAGCTAGGCATCAAGAAGGCCGAGAAGACCAAGGTGCAGTGTGTACGGTATGCGGACGACTTCGTGATCCTGGCAGCCTCGAAAGAGCTGCTGGAGGAAGAGGTCAAGCCCTGGGTAGAGCAATTCCTGTCAGTACGAGGGGTTGAATTATCTCGGGAGAAAACGCGCATCACGCACATTCACCAGGGATTCGATTTCTTGGGGTGGAGTTTCAGGAAGTACGTGCCGAAGTCACCACGCAGGAAGGCCAAGCTGCTGATCAAGCCCTCGAAGAAGAACGCCTCGGCGTTGTATCGGAAGGTGCGCGAGATCATCAAAAGTAGTGGGGCACTGACGCAGGAAGCGTTGATCGGCCAACTGAACCCGGTACTGAAGGGGTGGGCACAATACCACTCCCCGGTCGTGGCAAAACAAACCTTCAGCAGGCTGGATCATCTGATCTTTTGGCGAATCTGGAGGTGGGCGAAACGTAGGCATCCAAGGAAGTCGGCTGATTGGATCAGGAATAAATACTTCCGATCCATAGGCGGGCAGAGCTGGGTGTTCGCGTACCCCTACAAGAATGGTAAGGGAGAAAAGCAGTACCGCCGGCTATACCTGTTGGCGGGAACCGCAATCGTGCGTCACAAGCGTCTAGCCGGGGCTTACAACCCCTATGATGTGAGGCGCTGA
PROTEIN sequence
Length: 488
MKTQPATPVASAPSGGVMNWHDLDWATIQQAVRKTQLKIAQATQEGNWRRVKRLQRMLTYSFYGRCLAVRRVTENRGRKTPGVDGETWGSPQAKLRAVGSLSKQRGYRPKPLRRVWIPKPGKLEERPLGIPTMLDRAMQALHLQALEPVIESTSDPKSYGFRPDRSTADAMVELFHLLSPQTAPVWILEGDIKGFFDNINHDWLCRNVSMDTKVLRKWLKAGVIDRRQLMATEAGTPQGGIISPCLANATLNGLETQLKRHLAKKLGIKKAEKTKVQCVRYADDFVILAASKELLEEEVKPWVEQFLSVRGVELSREKTRITHIHQGFDFLGWSFRKYVPKSPRRKAKLLIKPSKKNASALYRKVREIIKSSGALTQEALIGQLNPVLKGWAQYHSPVVAKQTFSRLDHLIFWRIWRWAKRRHPRKSADWIRNKYFRSIGGQSWVFAYPYKNGKGEKQYRRLYLLAGTAIVRHKRLAGAYNPYDVRR*