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NECEvent2014_5_1_scaffold_1597_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(1042..1812)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator PrtR n=83 Tax=Pseudomonas aeruginosa RepID=PRTR_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 511
  • Evalue 4.40e-142
  • rbh
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 511
  • Evalue 1.20e-142
  • rbh
HTH-type transcriptional regulator PrtR {ECO:0000313|EMBL:CEI00650.1}; Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI78613.1}; Transcriptional regulator {ECO:0000313|EMBL:AKE67297 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 256.0
  • Bit_score: 511
  • Evalue 6.10e-142

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 771
ATGGACAAGAGCACCCAGATCCCGCCCGACAGCTTCGCCGCTCGCCTCAAGCAGGCCATGGCGATGCGCAACCTGAAGCAGGAAACCCTCGCCGAAGCGGCAGGGGTTTCGCAGAACACCATTCACAAGCTGACCTCGGGCAAGGCCCAGAGCACCCGCAAGCTGATCGAGATCGCGGCGGCCCTGGGCGTCTCGCCGGTCTGGCTGCAGACCGGCGAAGGCGCTCCAGCCGCGCGCAGTGCCGTGTCCGTGGCCGATGGCAGCCCATTGGTGCTGGAACCGCTGCATCCGTGGGACAGCGACACACCGCTGGACGAAGACGAAGTGGAACTGCCGCTGTACAAGGAAGTGGAGATGTCCGCCGGCGCCGGACGCACTGCGGTGCGCGAGATAGAGGGGCGCAAGCTGCGTTTTTCCTACGCCACGCTGCGTGCCTCGGGCGTCGATCCGTCGGCGGCGATCTGCGCCCAACTCACCGGCAACAGCATGGAACCGCTGATCATGGATGGCTCCACCATCGGCGTGGACACCGCCACCACCCATATCACCGATGGCGAGATCTACGCCCTCGAACATGACGGCATGCTGCGGGTGAAGTTCGTCTATCGCCTGCCCGGCGGCGGCATTCGCCTGCGCAGCTTCAACCGCGAGGAATATCCGGACGAGGAGTACTCGCCGGAGGACATGCGCAGCCGCCAGATCAGCATGATCGGTTGGGTCTTCTGGTGGTCCACCGTACGCCACCGGCGCGGCCCGTCCCTGGTGCGGTGA
PROTEIN sequence
Length: 257
MDKSTQIPPDSFAARLKQAMAMRNLKQETLAEAAGVSQNTIHKLTSGKAQSTRKLIEIAAALGVSPVWLQTGEGAPAARSAVSVADGSPLVLEPLHPWDSDTPLDEDEVELPLYKEVEMSAGAGRTAVREIEGRKLRFSYATLRASGVDPSAAICAQLTGNSMEPLIMDGSTIGVDTATTHITDGEIYALEHDGMLRVKFVYRLPGGGIRLRSFNREEYPDEEYSPEDMRSRQISMIGWVFWWSTVRHRRGPSLVR*