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NECEvent2014_5_1_scaffold_1703_4

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(2204..2476)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU-alpha n=133 Tax=Pseudomonas RepID=DBHA_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 177
  • Evalue 5.30e-42
integration host factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 177
  • Evalue 1.50e-42
Transcriptional regulator {ECO:0000313|EMBL:EVT83732.1}; TaxID=1441931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 177
  • Evalue 7.30e-42

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGCGTAAACCAGAACTAGCCGCCGCTATCGCCGAAAAGGCCGATCTCACCAAGGAACAGGCCAATCGCGTTCTCAACGCCCTGTTGGATGAAATCACCGGCGCGCTGAACCGCAAGGACAGCGTGACCCTGGTCGGTTTCGGCACCTTCCTGCAACGCCATCGCGGAGCCCGCACGGGGAAGAACCCGCAGACCGGCCAGCCGGTGAAGATCAAGGCCAGCAACACCGTCGCCTTCAAGCCGGGCAAGGCCCTGCGCGACGCGGTCAACTGA
PROTEIN sequence
Length: 91
MRKPELAAAIAEKADLTKEQANRVLNALLDEITGALNRKDSVTLVGFGTFLQRHRGARTGKNPQTGQPVKIKASNTVAFKPGKALRDAVN*