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NECEvent2014_5_1_scaffold_1706_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(2..286)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=2 Tax=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) RepID=U5R1T2_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 1.40e-45
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 4.00e-46
LysR family transcriptional regulator {ECO:0000313|EMBL:ETU84684.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 189
  • Evalue 2.00e-45

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGCATCCCCTGCTGCGCCGCCTCGATCTCAACCTCCTGCTTGTCTTCGACGCCCTGTATCGCCACCGCAACGTCGGCACCGCAGCCAGCGAACTGGCGATCAGCGCCTCGGCCTTCAGCCATGCGCTGGGGCGCCTGCGCCAGGGGCTGGACGACGAGCTGTTCCTGCGCCAGGGCAACCGCATGCAGCCGACCCAGCGTGCCGAGCACCTGGCCGCTGCGGTGGCCGCCGCCCTGCGCGCCCTCGGCGAGGGGCTGGAAGAGTGGCGGCCGTTCGTACCGGGA
PROTEIN sequence
Length: 95
MHPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPG