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NECEvent2014_5_1_scaffold_1715_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(2..715)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=109 Tax=Pseudomonas RepID=G4LTX0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 232.0
  • Bit_score: 459
  • Evalue 2.40e-126
  • rbh
Glycine cleavage system transcriptional activator GcvA similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 232.0
  • Bit_score: 459
  • Evalue 6.70e-127
LysR family transcriptional regulator {ECO:0000313|EMBL:ERV81295.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 232.0
  • Bit_score: 459
  • Evalue 3.30e-126

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGAGCGACCTCCCTCCCCTCACCGCCCTGCGCAGCTTCGAAGCGGTCGCCCGGCTCGGCAGCATCAGCCAGGCCGCCAGCGAGCTGCACGTCACCCACTCAGCGATCAGCCAGCAGATCAAGCTGCTGGAAAACCTCCTCGGCCTGGCCCTGTTCGTCCGCGAGGGGCGCGGCCTGCGCCTGAGCGAGAACGGCCGGTTCTACGCCCTGCAGGTACGCGCCTCTCTGGGCGAGATCGCCGACGCCACGCGGGTGGTGCGGGCGCGTCCGCGGGAGGGCGAGCTGGTGGTCACGGTGATGCCGTCCTTCGGCCTGAACTGGCTGCTGCCTCGCCTGCCGCGCTTTCGCGAGCGCCATCCGCACTGTCGCGTGCGGCTGGTGGCCAGTCTCGACGTGCAGAACCTGCGCCAGGGCCTGGCCGACCTCGGCGTACGCATCGGCAAGGGCGACTGGGAAGGGGTCGGTCGGGAACGCCTGTTCGACGACGAGTTGCTGATGGTCGCCGCGCCCGACTTCAACGGCGGCCGCCTGCCGCGCACGCCGAGCGAGATCGTCGCCTGCCCTACACTGCGCTCCACCGAATCCTGGGCGCTCTGGTGCCAGCGCGCCGGCGTGGCGGAACCGCAGCACGGACTGCTGATCAATGACTCGAACCTGCTGCTGGAAGCCGTGCGCCTGGGCCAGGGCATCGCCCTGCTCGCTGCCTGTGCCGGG
PROTEIN sequence
Length: 238
MSDLPPLTALRSFEAVARLGSISQAASELHVTHSAISQQIKLLENLLGLALFVREGRGLRLSENGRFYALQVRASLGEIADATRVVRARPREGELVVTVMPSFGLNWLLPRLPRFRERHPHCRVRLVASLDVQNLRQGLADLGVRIGKGDWEGVGRERLFDDELLMVAAPDFNGGRLPRTPSEIVACPTLRSTESWALWCQRAGVAEPQHGLLINDSNLLLEAVRLGQGIALLAACAG