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NECEvent2014_5_1_scaffold_1865_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(2..502)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=2 Tax=Pseudomonas aeruginosa RepID=U8HIC5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 325
  • Evalue 3.80e-86
  • rbh
bacterial regulatory helix-turn-helix , lysR family protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 325
  • Evalue 1.10e-86
Transcriptional regulator {ECO:0000313|EMBL:AHW70292.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 325
  • Evalue 5.30e-86

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGGCCCGGCTTGAAGTCAACCGTTCCGGCGAACTGGAGGTGTTTGCCCGGGTCGTCGAGTCGGGGGGCTTTTCCGCCGCCGCTCGACGTTGCGGCATGACGCCCTCGGCAGTCAGCAAGCTGATCACCCGGCTCGAACAGCGCCTGGGAACCCGCTTGCTGAACCGCTCCACCCGTCAATTGCAACTGACACCCGAGGGATGCGCGTTCTACGAGCGCGGGGTGCGTATCCTGGCCGATCTGGAGGAAGCCGAGCGGTGTGCGAGCGAAAACGCGGCGCCGCGTGGGCGCTTGCGAGTCAATGCCAACGTGCCTTTCGGGCATCACTTCCTGCTGCCGCTGGTGCCCGAGTTCCTCGCGCAGCATCCCGAGGTGACGCTGGATATCGTGCTGACCGATGAGGTCGTCGACATCCTCGAGCAGCGCACCGACGTGGCCGTGCGCGCGGGGCCGCTGAAAAGCTCGAGCCTGGTGGCGCGCAAGCTGGGGAGCACGCGCATG
PROTEIN sequence
Length: 167
MARLEVNRSGELEVFARVVESGGFSAAARRCGMTPSAVSKLITRLEQRLGTRLLNRSTRQLQLTPEGCAFYERGVRILADLEEAERCASENAAPRGRLRVNANVPFGHHFLLPLVPEFLAQHPEVTLDIVLTDEVVDILEQRTDVAVRAGPLKSSSLVARKLGSTRM