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NECEvent2014_5_1_scaffold_1996_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(3..1322)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1402581 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 440.0
  • Bit_score: 876
  • Evalue 1.60e-251
Transcription-repair-coupling factor n=1 Tax=Pseudomonas aeruginosa C48 RepID=U8D803_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 440.0
  • Bit_score: 877
  • Evalue 5.20e-252
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 440.0
  • Bit_score: 876
  • Evalue 3.30e-252

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1320
TTGCCCGTGTCCGTACTGCGTCTTCCCAGCCTGCCGGCCAGCGCCGGCAAGCAACACTGGGGCAACCTCCCCGGTGCCGCGCTGAGCCTGGCTGTCGCCGAGGCCGCCAGTTCCGCCAAGCGCTTCACCCTGCTGCTGACCGCCGACAGCCAGAATGCCGAACGCCTGGAACAGGAACTGCGGTTCTTCGCCCCCGACCTGCCGGTATTGCATTTCCCCGATTGGGAAACCCTGCCCTACGACGTCTTTTCGCCGCACCAGGACATCATTTCCCAGCGCATCGCCGCCCTCTACCAGTTGCCGCAGCTCAAGCACGGCGTGCTGGTGGTGCCGATCTCCACCGCCTTGCACCGCCTGGCGCCGACCCGCTTCCTGCTCGGCAGCAGCCTGGTCCTCGACGTCGGCCAGAAACTCGACGTCGAGCGGATGCGCCTGCGCCTGGAAGGCGCCGGCTACCGCTGCGTCGACACGGTCTACGAGCACGGCGAGTTCGCCGTCCGCGGCGCGCTGATCGACCTGTTCCCGATGGGCAGCGAGTTGCCCTTCCGTATCGACCTGTTCGACGACGAGATCGAGACCCTGCGCACCTTCGACCCGGAGACCCAGCGCTCCATCGACAAGGTCGAGTCGATCCGCCTGCTGCCGGCACGCGAATTCCCCCTGAACAAGGAAGCGGTCACCGGCTTCCGCGGCCGCTTCCGCGAGCGCTTCGACGTCGACTACCGGCGCTGCCCGATCTACCAGGACCTCGCCAGCGGTTTGACACCCTCGGGAATCGAGTACTACCTGCCGCTGTTCTTCGAGGAAACCGCGACCCTCTTCGACTACCTGCCGCAAGACACCCAGGTGTTCTCCCTGCCCGGCATCGAACAGGCCGCGGAGCAGTTCTGGAATGACGTACGCAGCCGCTACGAGGACCGCCGGGTCGATCCGGAACGGCCATTGCTGCCGCCGGCGGAAGTGTTCCTTCCGGTGGAAGACTGCTTCGCCCGGCTGAAGAACTGGCCACGGGTGGTCGCCAGCCAGGAGGACGTCGAGCCGGGCGTCGGGCGCGAGCGCTTCCCGGCCCTGCCGCTGCCGAACCTGGCGATCGAAGCCAAGGCCGCCGAGCCGCTGGCCGCGCTGCGCCGGTTCATCGAGGAGTTCCCCGGCCGCGTACTGTTCTGCGCCGAATCGGCCGGACGCCGGGAAGTCCTGCTGGAGCTGCTGGCCCGACTGAAGCTGCGCCCCGAGGAAGTCGACGGCTGGCCGGCCTTCCTCGCCAGCCAGGCACGCCTGGCGATCAGCATCGCGCCGCTGGACGAGGGCCTGCTGCTGGAC
PROTEIN sequence
Length: 440
LPVSVLRLPSLPASAGKQHWGNLPGAALSLAVAEAASSAKRFTLLLTADSQNAERLEQELRFFAPDLPVLHFPDWETLPYDVFSPHQDIISQRIAALYQLPQLKHGVLVVPISTALHRLAPTRFLLGSSLVLDVGQKLDVERMRLRLEGAGYRCVDTVYEHGEFAVRGALIDLFPMGSELPFRIDLFDDEIETLRTFDPETQRSIDKVESIRLLPAREFPLNKEAVTGFRGRFRERFDVDYRRCPIYQDLASGLTPSGIEYYLPLFFEETATLFDYLPQDTQVFSLPGIEQAAEQFWNDVRSRYEDRRVDPERPLLPPAEVFLPVEDCFARLKNWPRVVASQEDVEPGVGRERFPALPLPNLAIEAKAAEPLAALRRFIEEFPGRVLFCAESAGRREVLLELLARLKLRPEEVDGWPAFLASQARLAISIAPLDEGLLLD