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NECEvent2014_5_1_scaffold_2011_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(2..274)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator RtcR n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8LYE2_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 189
  • Evalue 1.80e-45
transcriptional regulator RtcR similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 189
  • Evalue 5.00e-46
Transcriptional regulator RtcR {ECO:0000313|EMBL:CKI14139.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas ae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 91.0
  • Bit_score: 189
  • Evalue 2.50e-45

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
ATGAAACGCACGGTCGCCATCGGCTTCATCGGCGCCACCCTCGACCGTCTCGGCAAGGGCGCGGCGCGCTGGCAAAAGTGGCGGCCGAGCATCGGCCTGTGCCAGCAGCCGGACCTGCTGATCGACCGCCTCGAACTGATCCACGGCAACGACGCCCGCGACCTCGGCCTGGCCGAGCGGATTCGCGCCGACATCGCCGCGGTGTCGCCGCATACCGAGGTCCGCCTGCAGCAGATGGAACTGCGCAACCCCTGGGACTTCGAGGAGGTCTAT
PROTEIN sequence
Length: 91
MKRTVAIGFIGATLDRLGKGAARWQKWRPSIGLCQQPDLLIDRLELIHGNDARDLGLAERIRADIAAVSPHTEVRLQQMELRNPWDFEEVY