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NECEvent2014_5_1_scaffold_2011_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 2135..2290

Top 3 Functional Annotations

Value Algorithm Source
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomona similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 52.0
  • Bit_score: 109
  • Evalue 1.10e-21
Protein rtcB n=5 Tax=Pseudomonas aeruginosa RepID=U8NT65_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 52.0
  • Bit_score: 109
  • Evalue 7.70e-22
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 52.0
  • Bit_score: 109
  • Evalue 2.20e-22

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 156
ATGAAAGACATGAATATCCTCGAAGTGGCCGGCGGCAAGCCGATCAAGCTCTGGACCCAGGGCGTCCCGGTGGAGGAGGAAGCGCGCCAGCAGTTGCTGAACACGGCGAAGATGCCCTTCATCTTCAAGCACCTGGCGGTGATGCCTGACGTACAC
PROTEIN sequence
Length: 52
MKDMNILEVAGGKPIKLWTQGVPVEEEARQQLLNTAKMPFIFKHLAVMPDVH