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NECEvent2014_5_1_scaffold_2034_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(918..1520)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=128 Tax=Pseudomonas RepID=RL4_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 390
  • Evalue 1.10e-105
  • rbh
LSU ribosomal protein L4p (L1e) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 390
  • Evalue 3.20e-106
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 200.0
  • Bit_score: 390
  • Evalue 1.60e-105

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCAATTGAATGTGAACGGCGCTCAGGCTATCGAAGTCTCCGAGCGTACCTTTGGTGGCGAATTCAACGAGACCCTGGTGCACCAGGCAGTCGTGGCCTACATGGCTGGCGGCCGTCAGGGCAGCAAGGCGCAGAAGACTCGCTCCGAAGTCTCTGGTGGTGGCAAGAAGCCGTGGCGTCAGAAGGGCACCGGTCGTGCTCGTGCTGGCACCATCCGTAGCCCCATCTGGCGTGGGGGCGGCACCACTTTCGCCGCTAAACCGCGTAGCCACGAACAGAAGCTGAACAAGAAGATGTACCGCGCAGCACTGCGCTCCATCCTTGCCGAGCTCGTTCGTCTGGACCGTCTGGTCGTCGTTGCCGACTTCGCTGTCGATGCACCGAAAACCAAGGGCCTGGTTGCCAAGCTGGACACCCTGGGTCTGAAAGACGTGCTGATCGTGACCGATGGTGTCGACGAGAACCTGTACCTCGCTGCGCGCAACCTGGCGCACGTCGATGTACGTGATGTCCAAGGTTCCGACCCCGTCAGCCTGATCGCCTACGACAAGGTGCTGGTCACCGTGTCCGCCGTGAAGAAGTTCGAGGAGCTGCTGGGATGA
PROTEIN sequence
Length: 201
MQLNVNGAQAIEVSERTFGGEFNETLVHQAVVAYMAGGRQGSKAQKTRSEVSGGGKKPWRQKGTGRARAGTIRSPIWRGGGTTFAAKPRSHEQKLNKKMYRAALRSILAELVRLDRLVVVADFAVDAPKTKGLVAKLDTLGLKDVLIVTDGVDENLYLAARNLAHVDVRDVQGSDPVSLIAYDKVLVTVSAVKKFEELLG*