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NECEvent2014_5_1_scaffold_2038_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(1..222)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane OprD family porin n=1 Tax=Pseudomonas aeruginosa 62 RepID=U9D4Y4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 151
  • Evalue 4.30e-34
Outer membrane porin, OprD family similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 151
  • Evalue 1.20e-34
Outer membrane protein {ECO:0000313|EMBL:AHW70659.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 151
  • Evalue 6.10e-34

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGTTGAAGAAAAGGATTTGCCTGCTGGCACTGGGCATCGCGACTGCAAGCCAGGCGATGGCCAATGACCAAGAAGCAGCAAAGGGGTTTGTCGAGGACAGCCACCTCGATCTGTTCTTCCGCAATGGCTACATCAGCCGTGACTACAACCATGGCCGGCAGGACAAGGCCGAATGGGGCCAGGCCGCCACTGCCACCTTCACCTCCGGCTTCACCCAGGGG
PROTEIN sequence
Length: 74
MLKKRICLLALGIATASQAMANDQEAAKGFVEDSHLDLFFRNGYISRDYNHGRQDKAEWGQAATATFTSGFTQG