ggKbase home page

NECEvent2014_5_1_scaffold_2112_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(2..1579)

Top 3 Functional Annotations

Value Algorithm Source
Reverse transcriptase n=30 Tax=Pseudomonas aeruginosa RepID=R8Z711_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 526.0
  • Bit_score: 1074
  • Evalue 0.0
  • rbh
DNA polymerase {ECO:0000313|EMBL:AKE67259.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 526.0
  • Bit_score: 1074
  • Evalue 0.0
reverse transcriptase similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 526.0
  • Bit_score: 1074
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
ATGAAAGAACTCAGCCCATCGGCCGGGTCTGCGCTTTCCGGCGCTCCGCAGCAGTGGCACGACATCGACTGGTGTCGGGTCCAGCGGAATGTCCGGGGAATGCAGGTACGGATTGCGAAGGCTTGTCGGGAAGGCAAATGGCGCAGGGTGAAGGCCCTACAACGGATGCTGACCCGCTCGACGTCGGCCAGGTACCTGGCTGTACGGAGAGTCACTGAAAACCAGGGCAAGCGCACGGCGGGAGTCGACCGCGTGCTCTGGGATACGCCTGACACCAAGTGGAAAGCGGCACAAGGGTTGAAAAGGCGCGGGTACCAACCTCGGCCTCTACGGCGAGTGTTCATCCCGAAGTCGAACGGAAAGGAGCGCCCCCTGGGTATCCCGACCATGACTGACAGGGCAATGCAGGCACTCTACCTGCTCGCTCTGTCGCCCATTGCAGAAACCACCGGCGATCCGAACAGCTATGGCTTCAGGATCGAGCGATCCACGGCGGATGCAATGTCCCAGTTGTTCGTTTGCCTATCCGGAAAGGCTTCGGCCCAATGGATACTGGAGGCGGACATACAAGGGTGTTTTGACCACATCAATCATGACTGGCTACTGAACCATGTCCCCACGGACAAGGTGATCCTCCGGAAATGGTTGAAGGCCGGCGTGATCCACAAAGGCCAGCTCCAGGCAACGGATGCTGGAACACCTCAAGGCGGAATCATCTCGCCTACTTTGGCAAACATGGTGCTCGATGGCCTGGAATCACAGCTCAAGCGACACCTGGGCGTGACAAGGGCGAAGAAGCTGAAACTCAATGTGGTGCGCTATGCGGACGACTTCGTCATCACCGGTGTCTCTCCCGAGGTACTGGAGAAAGAAGTCAAACCCTGGGTAGAGCAGTTCCTGGCGGTACGCGGGCTGCAGCTCTCTCTGGAGAAAACGCGGATCGCCCACATAGATCAGGGCTTCGACTTCCTCGGTTGGAACTTCCGCAAGTACAACGGGAAGCTTCTGATCAAACCCAGCCAGAAGAACGCGAAAGCGTTCTACGGCAAGGTGAAGGAGGTCATCGAAACCAGCAGGACGGCAAGGCAAGAGGACTTGATCCGAACGCTGAATCCGATTCTGCGCGGCTGGGCGCTGTATCACCAGCCAGTGGTTGCCAAGCAAACGTTCAGCCGCATGGACAACAGAGTGTTTCTCAAGCTCTGGCGTTGGGCGAAACGGCGGCACCCGAACAAGTCACTGGATTGGATCAGGAGGCGATATTTCCGGATTCACGGGGACAAGACTTGGGTGTTCGCTACCACGGTGCTGGAAAGCAACGGTAAGAAACGGGAGGTCGCGCTGTACTCGCTGGCGAGCACGCCGATTGAGCGACATAGGAAGGTGAGTGGGGAATACAACCCCTACGATCCAGCCATGGAAGCAATAGGTGAAAAACTGCGAACGGAACGGATGTTGAAAAAGCTGAAGTACCGAACTCAGATCAGAAACCTATACCTCTCCCAGAAGGGGCTCTGCTCGCTCTGCAACCAACCGATAACCAGGGAAACCGGGTGGCACGACCACCACATTATCTAC
PROTEIN sequence
Length: 526
MKELSPSAGSALSGAPQQWHDIDWCRVQRNVRGMQVRIAKACREGKWRRVKALQRMLTRSTSARYLAVRRVTENQGKRTAGVDRVLWDTPDTKWKAAQGLKRRGYQPRPLRRVFIPKSNGKERPLGIPTMTDRAMQALYLLALSPIAETTGDPNSYGFRIERSTADAMSQLFVCLSGKASAQWILEADIQGCFDHINHDWLLNHVPTDKVILRKWLKAGVIHKGQLQATDAGTPQGGIISPTLANMVLDGLESQLKRHLGVTRAKKLKLNVVRYADDFVITGVSPEVLEKEVKPWVEQFLAVRGLQLSLEKTRIAHIDQGFDFLGWNFRKYNGKLLIKPSQKNAKAFYGKVKEVIETSRTARQEDLIRTLNPILRGWALYHQPVVAKQTFSRMDNRVFLKLWRWAKRRHPNKSLDWIRRRYFRIHGDKTWVFATTVLESNGKKREVALYSLASTPIERHRKVSGEYNPYDPAMEAIGEKLRTERMLKKLKYRTQIRNLYLSQKGLCSLCNQPITRETGWHDHHIIY