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NECEvent2014_5_1_scaffold_2181_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 3..68

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=110 Tax=Pseudomonas RepID=B7V773_PSEA8 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 270
  • Evalue 8.90e-70
DksA/TraR family C4-type zinc finger protein; K06204 DnaK suppressor protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 270
  • Evalue 2.80e-70
RNA polymerase-binding transcription factor DksA; TaxID=1402515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWHPSA015.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 134.0
  • Bit_score: 270
  • Evalue 1.80e-69

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 66
AGCGAGCAGCAGGAGGGCCAGGCAGTAAAGGCGGAGGACGCGGCGCATCGGTGGATCCCGGGATGA
PROTEIN sequence
Length: 22
SEQQEGQAVKAEDAAHRWIPG*