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NECEvent2014_5_1_scaffold_4753_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(1..1035)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1457392 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 345.0
  • Bit_score: 685
  • Evalue 3.20e-194
Ribonuclease R n=6 Tax=Pseudomonas aeruginosa RepID=Q02F81_PSEAB similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 345.0
  • Bit_score: 685
  • Evalue 3.90e-194
rnr; exoribonuclease RNase R similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 345.0
  • Bit_score: 685
  • Evalue 6.40e-195

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
TTGAGCCTCGGCCGCGGCAAGGCCGCGCCGACCCCGGGCGACTACCAGGAGGTGCTGGAGAAGATCCACGACCGCGCCGACTTCCGCCTGATCCAGACGGTCATGCTGCGTTCGCTCAGCCAGGCGGTGTACAGCCCGGACAACAATGGCCACTTCGGCCTCAACTACGACGCCTACACCCACTTCACCTCGCCGATCCGGCGCTACCCGGACCTGCTGGTGCATCGTGCGATCCGCAGTGTGATCCGCTCCAAGGCGGAGACTCCGCACGTGCAGCGGGCCGGCGCGGCGAGCATGCCCAAGGCGCGTATCTATCCGTACGACGAATTGCGCCTGGACCAGTTGGGCGAGCAGTGCTCGATGACCGAGCGGCGTGCCGACGAGGCCACCCGCGACGTGACCAACTGGCTGAAGTGCGAATACATGCGCGAGCGGGTCGGCGAGACCTTCCCTGGCGTAATCACTGCGGTCACCGGTTTCGGTCTGTTCGTCGAGCTGACCGACATCTTCGTCGAAGGCCTGGTCCATGTGACCGCGCTGCCCGGCGACTACTATCATTTCGACGCCGTGCACCATCGCCTCAGCGGCGAACGCACCGGGCGCAGCTTCCGTCTCGGCGACACCACGGAAGTGGTAGTGGCGCGGGTCGACCTGGACGAGCGGAAGATCGATTTCGAGCTGGCCGGAAACGTGCTGAGCGCGCCGATCGGACGCAAGAAGCGCAACGGCGACAAGTCGGCGAACGCCGGCAAGGCGCCGAAGGGGCGCAAGGGCGCATCCGTGCCCGAGGTCGACCTGGAGCCGGCGCTGGCCAGTCCCGACGCCGCGGTGGTGCCGCGGCGCAAGGCCGGCAAGGTGCAGGCGCTGCCGCCGGTCGCGCCGGAGCTGCTGGCGCAGGCCGCGGAGATGCTCGGCAACACCGACGTGCGCAAGAGTCGCGAGGTGAAGCAGGCGCTGCTCGCCGAGGCGCGTGTCGGCGGCAAGGACAAGGGCGGGAAGAAGGGCAAGGTCGTTCCTGCGGGCAAGAGCGCGAAG
PROTEIN sequence
Length: 345
LSLGRGKAAPTPGDYQEVLEKIHDRADFRLIQTVMLRSLSQAVYSPDNNGHFGLNYDAYTHFTSPIRRYPDLLVHRAIRSVIRSKAETPHVQRAGAASMPKARIYPYDELRLDQLGEQCSMTERRADEATRDVTNWLKCEYMRERVGETFPGVITAVTGFGLFVELTDIFVEGLVHVTALPGDYYHFDAVHHRLSGERTGRSFRLGDTTEVVVARVDLDERKIDFELAGNVLSAPIGRKKRNGDKSANAGKAPKGRKGASVPEVDLEPALASPDAAVVPRRKAGKVQALPPVAPELLAQAAEMLGNTDVRKSREVKQALLAEARVGGKDKGGKKGKVVPAGKSAK