ggKbase home page

NECEvent2014_5_1_scaffold_4844_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 1..396

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Pseudomonas aeruginosa 19660 RepID=U9AJY9_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 260
  • Evalue 6.90e-67
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 260
  • Evalue 1.90e-67
RNA polymerase sigma factor {ECO:0000313|EMBL:ERV82343.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas a similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 131.0
  • Bit_score: 260
  • Evalue 9.60e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 396
AGCCTGATCCGCAGCGAGAGCCAGCCGCAGGGCCGGGCGAGCTTCCGCACCTGGCTCTACCAGATCGCCCGCAACCGCCTGATCGATCATTGGCGCAAGCATGGCCAGCGCCAGCCGTTGCAGGACAGCTACGACGAACAGTTGCACGCGCAACCCGACCAGGGCGCCGGCCCCGAGCAGCAGCTCAGCCTGAGCCGCGACGGCGAGCGCTTGCAGAGCGCGCTGGAGACCCTGCCCGAGGAACAGCGCGAGGTATTCCTGATGCGCGCCCACGGCGAACTGGAACTGGCCGAGATCGCCACGCTCACCCAGTCGCCGCTGGAGACGGTGAAGAGCCGTTTCCGCTACGCGGTGCAGAAGCTGCGCCGGCTGCTGGCCGAGGAGGTGGCGGTATGA
PROTEIN sequence
Length: 132
SLIRSESQPQGRASFRTWLYQIARNRLIDHWRKHGQRQPLQDSYDEQLHAQPDQGAGPEQQLSLSRDGERLQSALETLPEEQREVFLMRAHGELELAEIATLTQSPLETVKSRFRYAVQKLRRLLAEEVAV*