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NECEvent2014_5_1_scaffold_3793_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(1..885)

Top 3 Functional Annotations

Value Algorithm Source
Transmembrane sensor n=4 Tax=Pseudomonas aeruginosa RepID=K1D9D1_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 295.0
  • Bit_score: 583
  • Evalue 1.00e-163
  • rbh
iron dicitrate transporter FecR similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 295.0
  • Bit_score: 582
  • Evalue 8.50e-164
Transmembrane sensor {ECO:0000313|EMBL:AHW71428.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugino similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 295.0
  • Bit_score: 582
  • Evalue 4.20e-163

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
ATGAGCGAGAAGCCGGAACGGCAACGCATCGTCGAGGAGGCCATCGAATGGATGGTGCGCCTGCAATCCGGCGACTTCAGCGCCGCCGAGGGCGATGCCCTGGAACGCTGGAAGGCGCTGTCGAGCGAGCATGCCGAGGTGTTCCGGCAACTGCTTGGCAGCCTCGCGCCGCTACAGGACTCGCCCTGGCGCGGCCAGCCGAGCGCTACCGTGCTGCGCGCCCTGGAGCAGCCGTCGAGCCGCCGGCGCTTCGTCGGCGGCGCCCTCGGGCTGTTCGTCCTGCTCGCCGGCGGCGCCGGCCTGGAGCGCTGGGTCCAGGCCGGCATGGGCCTGCCCGGCGAACTGGCGACCGGCACCGGCGAGCGCCGCGACTGGTTGCTGGCCGACGGCAGCCGCCTGCGCCTGAACGCGCGGAGCAAGGCGCGACCGCTGCTCGACGGCGCCCAGCGGCGCCTGGAGCTGCGGCGCGGCGCGATGCGCCTGGAAGTGAAGGAGGACCCGCGCGGCGCCTTCGCCCTCGACTGCGCCGCCGGACGGGTGGACTGCGCCAGCGGCAGCCTGCTGCTTGCCGAGGAGCGCGGGGCGATCCGCCTGGTGACCCTGCGCGGCAGCGCGCGGCTGACCACCGGCGAGGGACGCCAGCTGGTGGTGGCGGCACGGCGCAGCCTGCTGTTCGATGCCGGCGGCCTGCTCGAACAGGGCCCGATGCAGGCCGGAGAGGACGCCTGGGCCAGCGGCTGGCTGGAGGTCCACGACCGTTCCCTGGCCTGGGTCGCGGAGGCCTTCCGGCCCTATCTGCCAGGCATCCTCCAGCTCGACGCGGAGATCGCCGGCAACCGCGTCAGCGGTCTGTTCCCGCTGGACGACATGCACACGTCCCTGGAC
PROTEIN sequence
Length: 295
MSEKPERQRIVEEAIEWMVRLQSGDFSAAEGDALERWKALSSEHAEVFRQLLGSLAPLQDSPWRGQPSATVLRALEQPSSRRRFVGGALGLFVLLAGGAGLERWVQAGMGLPGELATGTGERRDWLLADGSRLRLNARSKARPLLDGAQRRLELRRGAMRLEVKEDPRGAFALDCAAGRVDCASGSLLLAEERGAIRLVTLRGSARLTTGEGRQLVVAARRSLLFDAGGLLEQGPMQAGEDAWASGWLEVHDRSLAWVAEAFRPYLPGILQLDAEIAGNRVSGLFPLDDMHTSLD