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NECEvent2014_5_1_scaffold_2324_2

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: 1914..2015

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=3 Tax=Pseudomonas RepID=L1HVB0_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 34.0
  • Bit_score: 70
  • Evalue 4.40e-10
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 34.0
  • Bit_score: 70
  • Evalue 1.30e-10
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1333854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 34.0
  • Bit_score: 70
  • Evalue 6.20e-10

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Taxonomy

Pseudomonas alcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 102
ATGCTAACCCAGGAACAGGATCAGCAACTGGTTGAACGGGTACAGCGCGGAGACAAGCGGGCTTTCGATCTGCTGGTACTGAAATACCAGCACAAGATACTG
PROTEIN sequence
Length: 34
MLTQEQDQQLVERVQRGDKRAFDLLVLKYQHKIL