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NECEvent2014_5_1_scaffold_3205_3

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(1210..1524)

Top 3 Functional Annotations

Value Algorithm Source
dapF; diaminopimelate epimerase (EC:5.1.1.7) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 223
  • Evalue 3.50e-56
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 223
  • Evalue 1.80e-55
Diaminopimelate epimerase n=10 Tax=Pseudomonas aeruginosa RepID=E2ZS79_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 223
  • Evalue 1.30e-55

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
CCGGTACACAGCCTCGGTCCGCAACTGGAAGTCCATCCGCGCTTCCCGAAGAAGGCCAACATCGGCTTCCTCCAAGTGCTCGATCCGCACCATGCGCGCCTGCGCGTCTGGGAGCGCGGCGTCGGCGAGACCCAAGCCTGCGGCACCGGCGCCTGCGCCGCGGCGGTTGCCGGGATTCGCCAGGGCTGGCTGCAATCGCCGGTGCAGATCGACCTCCCCGGCGGCCGCCTGCACATCGAGTGGGCAGGTCCCGGCCAGCCCGTTATGATGACCGGGCCTGCCGTCCGCGTGTATGAAGGCCAGGTCCGCCTGTAA
PROTEIN sequence
Length: 105
PVHSLGPQLEVHPRFPKKANIGFLQVLDPHHARLRVWERGVGETQACGTGACAAAVAGIRQGWLQSPVQIDLPGGRLHIEWAGPGQPVMMTGPAVRVYEGQVRL*