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NECEvent2014_5_1_scaffold_3527_1

Organism: NECEvent2014_5_1_Pseudomonas_aeruginosa_rel_66_5

partial RP 39 / 55 MC: 2 BSCG 35 / 51 ASCG 10 / 38 MC: 2
Location: comp(1..222)

Top 3 Functional Annotations

Value Algorithm Source
RoxR n=88 Tax=Pseudomonas RepID=Q9HVS8_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 143
  • Evalue 6.90e-32
Dna binding response regulator PrrA (RegA) similarity KEGG
DB: KEGG
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 143
  • Evalue 1.90e-32
Two-component system response regulator {ECO:0000313|EMBL:ETU91144.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 74.0
  • Bit_score: 143
  • Evalue 9.70e-32

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGTCTGAAGAGCTGCTCTTCGAAGGGGAAGAACAACCCCATCTCCTGCTGGTGGACGACGATCCCACCTTTACCCGGGTCCTGGCCCGGGCCATGAGCCGTCGCGGCCTGCGGGTCAGCACCGCCGGCTCCGCCGAGGCAGGCCTGGCGCTGGCCCAGCAGGACACGCCGGACTATGCCGTGCTCGACCTGAAGATGGAAGGCGACTCCGGCCTGGTGCTG
PROTEIN sequence
Length: 74
MSEELLFEGEEQPHLLLVDDDPTFTRVLARAMSRRGLRVSTAGSAEAGLALAQQDTPDYAVLDLKMEGDSGLVL