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NECEvent2014_5_2_scaffold_221_2

Organism: NECEvent2014_5_2_Negativicoccus_succinicivorans_52_9

near complete RP 48 / 55 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: comp(1125..1334)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5921F related cluster n=1 Tax=unknown RepID=UPI0003D5921F similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 131
  • Evalue 2.60e-28
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedi similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 131
  • Evalue 3.50e-28
hfq; RNA-binding protein Hfq similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 66.0
  • Bit_score: 81
  • Evalue 8.50e-14

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Taxonomy

Clostridiales bacterium S5-A11 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 210
ATGACAAATAAAATAAATTTACAGGATGCTTTTCTTGATACCTTAAAAAAGGCGAAGGCCACAGTTAATATTTATCTTTTGAACGGGGTTAAACTGCAGGGAATTGTCAAAGATTATGATAATTTCACAGTATTACTTAAAAGTCAGGAAAAAGAACAGCTGATTTACAAGCATGCCATTTCTACGATTCAAGAAGGGGAAAAAGAGTGA
PROTEIN sequence
Length: 70
MTNKINLQDAFLDTLKKAKATVNIYLLNGVKLQGIVKDYDNFTVLLKSQEKEQLIYKHAISTIQEGEKE*