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NECEvent2014_5_2_scaffold_942_3

Organism: NECEvent2014_5_2_Negativicoccus_succinicivorans_52_9

near complete RP 48 / 55 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: 2572..4494

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D60D7F related cluster n=1 Tax=unknown RepID=UPI0003D60D7F similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 626.0
  • Bit_score: 1114
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Negativicoccus.;" source="Negativicocc similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 626.0
  • Bit_score: 1114
  • Evalue 0.0
rpoD; RNA polymerase similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 590.0
  • Bit_score: 388
  • Evalue 3.00e-105

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1923
TTGAAACAAAGCAAGTACGGAGCTGTGGAAGAGGAAGGAACTATGACGGCAACTAACCAAACCAAGACGACAAAAAAACAGACGCGCCTGACGGTGCCGGAACGAATCGAAATGGCGCGGCAAAATTTGATCGAATGGTATCAGTCAAAGCCGCAAGGTACTGCCGCCGCATCTTCCATTTTGGCTCCGCATCATTTTTCGAAACGCAGTCGCACATTGTTGACGCAGCAATTACAGGAGGCGGGTTTTCCGCTTGCGATCACGGAAGATGATCAAGTTACCGTGACGGAACCGGCAGAAATCCCCTCAAAGAAAACTAAACAAAAAGCAGGCACCGACAAAAAAGCGACCGCATCCAAAACTAAAAAGAAGAGTAAAGGGAAGGTATCGAAACGCACCGTCGCCGCCGATGATGCCCAATCGATGCAACGGCTGATCAAAGAAGGCGCCAGCCTTGATCAGATTCTGATGCTTTTGGTGGAACGCGGCCGTCGTGACGGCGTGTTGACGTATGAAGAAGTCATGGATGCCTTCGAACGGTTTGATTTAAGCGCGGAAAAAATTGAAAAAATTTACGCTCGCTTCTATAAAGAGAATATTGAAATGGTCAACAGCGAAGAGAAGGAAGAGGCGCTGGCGGAAGAGGATGAAGACGAAGACAGTGAAGCGCGCGAAGCGCGTAAAGCGGCATCGGAAAACTTGCAGGATGGCAATGACAATATCCATTTAGATGATCCGGTACGCATGTACCTTAAAGAAATCGGTCGTGTGTCACTGTTAAAAGCGCCGGAAGAAGTAGCGCTTGCCAAACGTATCGAAGCAGGCAAATTGATTATGGAAGCGCAGGCGCAACGACAGGCCGTGATCCGTTGGGTGACGGTGATGGCGCAGGTAAGTGATGCGCAGGGTGAAATTCCGTATACGGCGTTCCAAGTTCCTTCCGAATTGGAATGGAACGAAACGACGGCGGATATTTTGCAAACATCATTGGACATTTTGCAGATGAAGCCTGCGGACGGATTAAATATAGAGCAAGCGGTAGAAATGGCGACGGCCATGGCGGAACTTCCGTCCGATGAAGAAAACGCGGAGACAACGCCGAGCGAAGCCTTTTTATCACCTGACGAAGTGCAAAGCCGGTTGGAGGCAGGGCTCGTCACGGATGAAATGCGCCACAACGAGGGCAGCGTTTTAGCGGACGCGCATTTTGCCAAGCAGGATCTGACGGATGCCAATTTGCGTTTGGTCGTCAGTATTGCGAAACGCTACGTCGGCCGGGGCATGCAATTTTTGGATTTAATGCAAGAAGGTAATCTCGGTTTAATCAAAGCCGTCGATAAATTCGACTATAAAAAAGGTTACAAATTCAGCACGTATGCGACCTGGTGGATTCGCCAGGCGATTACCCGCGCGATCGCCGATCAGGCGCGTACGATTCGTATTCCGGTGCATATGGTGGAAACCATCAACAAACTTTCGCGAACGGCCCGCAATTTATTGCAGGAGCTGGGACGCGAAGCAACGCCGGAAGAAATCGCCGAGCAAATGGACATTACCGTGGAACGTGTGCGCGAGATCATGAAAATTTCGCAGGAACCGGTTTCGTTGGAAACGCCGATCGGTGAAGAAGAAGATTCCCACTTGGTGGAATTTATCGAAGACCGCAATGCCGTCGCTCCGGAAGAAGCAGCTTCCGCCATTTTGCTCAAGGAGCAGGTCGATGATATTTTGCAAGGTCTTACCAAACGCGAACGGGAAGTTATCTATTTGCGTTTCGGGTTAAAAGACGGTAAACAGAGAACGCTGGAAGAAGTCGGGCAATACTTTGACGTTACGCGCGAACGGATTCGTCAGATCGAGCGCAAAGCCTTGGAAAAATTGCGCAGCCGCGGGAAACGCGAGAAGATTACCGACTACCTCTGA
PROTEIN sequence
Length: 641
LKQSKYGAVEEEGTMTATNQTKTTKKQTRLTVPERIEMARQNLIEWYQSKPQGTAAASSILAPHHFSKRSRTLLTQQLQEAGFPLAITEDDQVTVTEPAEIPSKKTKQKAGTDKKATASKTKKKSKGKVSKRTVAADDAQSMQRLIKEGASLDQILMLLVERGRRDGVLTYEEVMDAFERFDLSAEKIEKIYARFYKENIEMVNSEEKEEALAEEDEDEDSEAREARKAASENLQDGNDNIHLDDPVRMYLKEIGRVSLLKAPEEVALAKRIEAGKLIMEAQAQRQAVIRWVTVMAQVSDAQGEIPYTAFQVPSELEWNETTADILQTSLDILQMKPADGLNIEQAVEMATAMAELPSDEENAETTPSEAFLSPDEVQSRLEAGLVTDEMRHNEGSVLADAHFAKQDLTDANLRLVVSIAKRYVGRGMQFLDLMQEGNLGLIKAVDKFDYKKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLSRTARNLLQELGREATPEEIAEQMDITVERVREIMKISQEPVSLETPIGEEEDSHLVEFIEDRNAVAPEEAASAILLKEQVDDILQGLTKREREVIYLRFGLKDGKQRTLEEVGQYFDVTRERIRQIERKALEKLRSRGKREKITDYL*