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NECEvent2014_5_2_scaffold_1024_1

Organism: NECEvent2014_5_2_Negativicoccus_succinicivorans_52_9

near complete RP 48 / 55 BSCG 48 / 51 ASCG 12 / 38 MC: 3
Location: 1..588

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1403945 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Nega similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 195.0
  • Bit_score: 392
  • Evalue 3.10e-106
UPI0003D6523C related cluster n=1 Tax=unknown RepID=UPI0003D6523C similarity UNIREF
DB: UNIREF100
  • Identity: 99.0
  • Coverage: 195.0
  • Bit_score: 392
  • Evalue 2.20e-106
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 54.9
  • Coverage: 195.0
  • Bit_score: 213
  • Evalue 5.30e-53

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Taxonomy

Negativicoccus succinicivorans → Negativicoccus → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 588
CTCGTCAATGCGCTGCTCTTTTACACGAAAGGGCATCTGGCGGAAATGAGCGATCCGATCCGACCGGGCATTGTGCATCGTTTGGATCGGGATACGTCCGGACTGTTGGTGGCGGCGAAAACGCCGCGCGGCCGCGACAGCCTGCAGGCGCAAATCCGCGCGCACTCGGCGGGACGGATTTACTATGCGCTGGTGCACGGCAATCCCTCGAACGAGCGCGGCATTATCAAATTGGCGCTCGGACGGGACGCGCGCGACCGGTTGCGTCAGGCGGTGCTGCCTGACGGACGCGACGCGACGACGCATTTTACGGTAGTCGAACGCATGCCGCATTACGCGCTGCTGCGTTTGGCGCTCGAAACGGGAAGGACGCATCAGATTCGCGTGCATTTATCCTATATCGGGTATCCGATCGTGCAGGATCCGCTCTACGGACGCAAACGCGATCGATTTCCGATCGAAGGACAGGCGTTGCACGCCGCCGAACTTTCATTTGACCGACCGGCGGACGGCGAACGGATCACCGTGACCGCGCCGTGGCCGGACGATTTTGCCGCGTGCCTGACGAAGGCCCGGGAGGAAGCGTAA
PROTEIN sequence
Length: 196
LVNALLFYTKGHLAEMSDPIRPGIVHRLDRDTSGLLVAAKTPRGRDSLQAQIRAHSAGRIYYALVHGNPSNERGIIKLALGRDARDRLRQAVLPDGRDATTHFTVVERMPHYALLRLALETGRTHQIRVHLSYIGYPIVQDPLYGRKRDRFPIEGQALHAAELSFDRPADGERITVTAPWPDDFAACLTKAREEA*