ggKbase home page

NECEvent2014_5_2_Negativicoccus_succinicivorans_52_9

NECEvent2014_5_2_Negativicoccus_succinicivorans_52_10
In projects: NECEvent2014_5_2

Consensus taxonomy: Negativicoccus succinicivorans  →  Negativicoccus  →  Selenomonadales  →  Negativicutes  →  Firmicutes  →  Bacteria

Displaying items 151-192 of 192 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_5_2_scaffold_1741 175_001_scaffold_1741
Phylum: Firmicutes (66.67%)
3 2922 bp 47.60 8.62 72.28
NECEvent2014_5_2_scaffold_1044 175_001_scaffold_1044
Species: Negativicoccus succinicivorans (60%)
5 4290 bp 46.62 8.53 96.50
NECEvent2014_5_2_scaffold_5751 175_001_scaffold_5751 4 1199 bp 53.04 8.51 80.82
NECEvent2014_5_2_scaffold_583 175_001_scaffold_583
Species: Clostridiales bacterium S5-A11 (75%)
8 7702 bp 51.19 8.47 90.83
NECEvent2014_5_2_scaffold_1598 175_001_scaffold_1598
Species: Negativicoccus succinicivorans (60%)
5 3113 bp 49.21 8.43 99.45
NECEvent2014_5_2_scaffold_1190 175_001_scaffold_1190
Species: Clostridiales bacterium S5-A11 (60%)
5 3883 bp 54.49 8.38 97.04
NECEvent2014_5_2_scaffold_3033 175_001_scaffold_3033
Species: Negativicoccus succinicivorans (100%)
2 1923 bp 51.43 8.35 100.00
NECEvent2014_5_2_scaffold_1849 175_001_scaffold_1849
Species: Negativicoccus succinicivorans (80%)
5 2796 bp 53.33 8.26 98.93
NECEvent2014_5_2_scaffold_799 175_001_scaffold_799
Species: Negativicoccus succinicivorans (50%)
4 5499 bp 48.28 8.24 100.38
NECEvent2014_5_2_scaffold_4485 175_001_scaffold_4485
Species: Negativicoccus succinicivorans (100%)
1 1446 bp 55.60 8.09 86.51
NECEvent2014_5_2_scaffold_1214 175_001_scaffold_1214
Species: Negativicoccus succinicivorans (80%)
5 3824 bp 55.81 8.08 98.38
NECEvent2014_5_2_scaffold_1580 175_001_scaffold_1580
Species: Clostridiales bacterium S5-A11 (60%)
5 3136 bp 48.41 8.08 91.14
NECEvent2014_5_2_scaffold_1530 175_001_scaffold_1530
Species: Negativicoccus succinicivorans (100%)
3 3216 bp 48.60 8.07 96.08
NECEvent2014_5_2_scaffold_1492 175_001_scaffold_1492
Species: Negativicoccus succinicivorans (50%)
4 3272 bp 56.23 8.02 94.53
NECEvent2014_5_2_scaffold_4752 175_001_scaffold_4752 3 1385 bp 58.63 8.01 78.63
NECEvent2014_5_2_scaffold_3094 175_001_scaffold_3094
Species: Negativicoccus succinicivorans (75%)
4 1892 bp 47.15 8.01 81.18
NECEvent2014_5_2_scaffold_2760 175_001_scaffold_2760
Species: Clostridiales bacterium S5-A11 (66.67%)
3 2062 bp 46.41 8.00 88.31
NECEvent2014_5_2_scaffold_2262 175_001_scaffold_2262
Species: Negativicoccus succinicivorans (50%)
4 2378 bp 46.76 7.95 89.70
NECEvent2014_5_2_scaffold_4852 175_001_scaffold_4852
Species: Negativicoccus succinicivorans (66.67%)
3 1364 bp 53.37 7.92 95.45
NECEvent2014_5_2_scaffold_4310 175_001_scaffold_4310
Species: Negativicoccus succinicivorans (66.67%)
3 1493 bp 54.19 7.84 91.63
NECEvent2014_5_2_scaffold_1346 175_001_scaffold_1346
Species: Negativicoccus succinicivorans (75%)
4 3524 bp 46.74 7.83 96.11
NECEvent2014_5_2_scaffold_3128 175_001_scaffold_3128 4 1882 bp 45.38 7.73 87.73
NECEvent2014_5_2_scaffold_5532 175_001_scaffold_5532
Species: Clostridiales bacterium S5-A11 (50%)
2 1240 bp 55.56 7.62 98.47
NECEvent2014_5_2_scaffold_2344 175_001_scaffold_2344
Species: Negativicoccus succinicivorans (66.67%)
3 2319 bp 54.03 7.44 83.96
NECEvent2014_5_2_scaffold_4149 175_001_scaffold_4149
Species: Clostridiales bacterium S5-A11 (100%)
2 1534 bp 47.07 7.24 100.13
NECEvent2014_5_2_scaffold_6217 175_001_scaffold_6217 1 1125 bp 60.18 7.20 81.87
NECEvent2014_5_2_scaffold_3636 175_001_scaffold_3636 1 1692 bp 52.96 7.09 26.06
NECEvent2014_5_2_scaffold_763 175_001_scaffold_763 7 5825 bp 50.94 7.06 85.65
NECEvent2014_5_2_scaffold_6759 175_001_scaffold_6759 2 1046 bp 51.43 6.88 21.61
NECEvent2014_5_2_scaffold_986 175_001_scaffold_986 7 4533 bp 57.22 6.82 72.20
NECEvent2014_5_2_scaffold_1922 175_001_scaffold_1922
Species: Clostridiales bacterium S5-A11 (66.67%)
3 2707 bp 48.84 6.82 96.31
NECEvent2014_5_2_scaffold_4589 175_001_scaffold_4589 4 1420 bp 55.70 6.76 40.07
NECEvent2014_5_2_scaffold_7085 175_001_scaffold_7085 2 1007 bp 59.19 6.70 82.22
NECEvent2014_5_2_scaffold_3424 175_001_scaffold_3424
Domain: Bacteria (66.67%)
3 1762 bp 55.22 6.64 75.60
NECEvent2014_5_2_scaffold_2488 175_001_scaffold_2488 3 2223 bp 59.83 6.61 98.92
NECEvent2014_5_2_scaffold_3254 175_001_scaffold_3254 3 1829 bp 61.51 6.56 87.42
NECEvent2014_5_2_scaffold_2454 175_001_scaffold_2454 5 2239 bp 56.36 6.43 89.50
NECEvent2014_5_2_scaffold_3450 175_001_scaffold_3450 3 1755 bp 58.52 6.32 79.66
NECEvent2014_5_2_scaffold_3500 175_001_scaffold_3500 3 1737 bp 53.89 6.30 92.92
NECEvent2014_5_2_scaffold_5370 175_001_scaffold_5370 3 1262 bp 56.02 5.94 73.53
NECEvent2014_5_2_scaffold_4534 175_001_scaffold_4534 3 1434 bp 59.83 5.44 91.63
NECEvent2014_5_2_scaffold_2469 175_001_scaffold_2469
Species: Eggerthella lenta (100%)
7 2235 bp 62.86 5.10 96.64
Displaying items 151-192 of 192 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.