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NECEvent2014_5_2_scaffold_1435_1

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: comp(1..915)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.7
  • Coverage: 300.0
  • Bit_score: 480
  • Evalue 1.40e-132
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 304.0
  • Bit_score: 394
  • Evalue 2.60e-107
Pseudouridine synthase n=1 Tax=Actinomyces sp. oral taxon 877 str. F0543 RepID=U1R0Q0_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 78.7
  • Coverage: 300.0
  • Bit_score: 480
  • Evalue 9.80e-133
  • rbh

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Taxonomy

Actinomyces sp. oral taxon 877 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 915
ATGAGTGACGAGTTCGAGCACCGCTACCTGCCAGTGCCGGACGCGCTGGTCGATACCCGCGTGGACGTGGCACTCTCACGCATGCTCGGCATGTCACGCTCTCAGGCCGGTGACCTTGTCAGCGCAGGACACGTGCGCATCAACGGTGCCGTCAGTCGGAAGTCGGACCGGCTCAGCCTCCAGGACCTCATCGAAGTCGACATACCGCAGCACCGTGTGCAGCCCGCACCCGTGACCGGCATGGACATCCTCTACGATGATGACGACATCGTCGTGGTCAACAAACCTGTCGGTGTTGCGGCACACACGGGCCCGGGATGGACCGGTCCCACAGTGATCGGCAACCTGGAAGCCGCAGGCTTCCGCATCGCACTGTCGGGCCCGCCCGAACGCCAGGGAATCGTGCACCGCCTGGATGTGGGTACATCTGGCGCCATGATGGTCGCCAAATCCGAACTGGCATATTCGGTGATGAAACGGGCCTTCAAGGAACGCACCGTCACGAAGATTTACCATGCCGTGGTCGCCGGACACCTGGATCCGCCATCGGGCACCATCGACGCGCCCATTGGCCGCCATCCGTCGCGCGAATGGCGCATGGCCGTTATCGAAGGTGGCAAGCGTGCCGTGACACATTACGACACCCTCGAACTCATGGCTGGTGCAGCCCTGCTGTCAATCCACCTGGAAACCGGCCGCACACACCAGATCCGCGTCCACATGGCAGCGGTCAACCATCCGTGTGTCGGCGACGTGTTCTACGGCGCTGACCCCACGCAGGCTGAACGCCTCGGCTTGGAACGTCAATGGTTGCACGCCGTCCAGCTCGGCTTCGCACACCCACGCACCGGCAAACACGTCACCGTGGACGCACCGTACATGGACGACCTTGATGCTGCCCTCACCCTCATGAGA
PROTEIN sequence
Length: 305
MSDEFEHRYLPVPDALVDTRVDVALSRMLGMSRSQAGDLVSAGHVRINGAVSRKSDRLSLQDLIEVDIPQHRVQPAPVTGMDILYDDDDIVVVNKPVGVAAHTGPGWTGPTVIGNLEAAGFRIALSGPPERQGIVHRLDVGTSGAMMVAKSELAYSVMKRAFKERTVTKIYHAVVAGHLDPPSGTIDAPIGRHPSREWRMAVIEGGKRAVTHYDTLELMAGAALLSIHLETGRTHQIRVHMAAVNHPCVGDVFYGADPTQAERLGLERQWLHAVQLGFAHPRTGKHVTVDAPYMDDLDAALTLMR