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NECEvent2014_5_2_scaffold_1162_2

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: 1099..2100

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D69046 related cluster n=1 Tax=unknown RepID=UPI0003D69046 similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 334.0
  • Bit_score: 436
  • Evalue 1.80e-119
  • rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI83111.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense D similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 334.0
  • Bit_score: 436
  • Evalue 2.50e-119
LacI family transcription regulator similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 318.0
  • Bit_score: 231
  • Evalue 3.20e-58

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGGCGAAAAGAGCTACTCAGAACGACGTTGCCAAGCTGGCGGGCACGTCAACAGCAGTCGTGAGCTACGTGATCAACAACGGTTCGCGCCCCGTTGCTCCCGAAACCCGCAAACGTGTGCTGGAAGCGATTAAGCAGACCGGCTACCGTCCGAACAACGCGGCCAGGGCACTGCTGACAGGCAAAGGCACCACTTTCGGAGTGGTTGTCCCTGACCTGGCGAACCCGTTCCTGGCACACATGCTCCAAAGCATCGAAGACGAGTTCTACGATCATGGGTATTCGCTGCTGGTCGCTGATTCACACGACTGCCTCAAGCGAGAAGAAGACATCATCGAGACTATGATGAGCCAGCAGGTCGCTGGCCTGGTGTGGTACTCGGTTGATCAGCCGCCGCCTGCTCACCTGCTGAAAGACTTCGCGCGGCCGGTGGTATTCGCCAATGCGTGCACTCCGACAGACACTGGCGAAGTTGCAGGGCAGCGTATCAGCGTCCTGGAAGACGAACGAGGAAGCGCCGCAGATCTGACGCGCGAACTCAAGAAACGCGGCTGCAGGACCATCGGGCACCTGGGCGGGCCGCGCGGACGCATCAACTCCGCCGAACGCAGCCGAGGCTGGTTCGACGCCCTCGACGACGGTTCAGACGGCAATCCCGAAGATCACCCCCACCACCTGAGTGCCCCCTACACGTACGAGGGTGGGTGGCAGATGGCCGAACACTTTGTGAACCTGGGCTGTGACGGGGTGGTCGTGTCCAATGAGATGCAGGCAGTAGGGCTCATGGCGCGCCTGGCATCACTGGGCGTGCGTATCCCCGACGACATCAGTGTGGTGGCCATGCACATCACTGCGCATGCCGAATACTGTGTGCCGGCACTGTCGGGAATCCACGTGGATATGGCTGATCTGTCAGCTCAGATCGCCACCTCGCTGCTGGGGTCAGGCGCGGCCGCCACCATCGTTCCGACAACATACTTCGTAGAGCGGGCCAGCTGTTAG
PROTEIN sequence
Length: 334
MAKRATQNDVAKLAGTSTAVVSYVINNGSRPVAPETRKRVLEAIKQTGYRPNNAARALLTGKGTTFGVVVPDLANPFLAHMLQSIEDEFYDHGYSLLVADSHDCLKREEDIIETMMSQQVAGLVWYSVDQPPPAHLLKDFARPVVFANACTPTDTGEVAGQRISVLEDERGSAADLTRELKKRGCRTIGHLGGPRGRINSAERSRGWFDALDDGSDGNPEDHPHHLSAPYTYEGGWQMAEHFVNLGCDGVVVSNEMQAVGLMARLASLGVRIPDDISVVAMHITAHAEYCVPALSGIHVDMADLSAQIATSLLGSGAAATIVPTTYFVERASC*