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NECEvent2014_5_2_scaffold_1722_2

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: 1153..2949

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B49E66 similarity UNIREF
DB: UNIREF100
  • Identity: 42.4
  • Coverage: 604.0
  • Bit_score: 443
  • Evalue 4.40e-121
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ETI83378.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 627.0
  • Bit_score: 440
  • Evalue 3.10e-120

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Taxonomy

Varibaculum cambriense → Varibaculum → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1797
ATGAAATCTCACTTCACAGTGCGTGCCAGAAAAGTCGCGGCGCTGCTCGGGGCGTCGATCGTAGCTGCCACAGCGTTTGTTGTACCGGTACAGCAGAGCAGCCAGGCTGCAGAGCGACCATTCCCTAGTTATGAGCTGTCGTACCAACGCATCGTTGGACAGAAAGATCCAAATTTCAATCCTGAGACCGATGAGGGTGACGGATGCATTCACTCAGCAAATCCGGAGCTGGCGCCCCTCCCCTTCTTTGGCTTCGAATCGGCCGCCATCAACCAGTGTGACGGCATGCGCGTAAAAGTTCGGTGGTTCTACGACAAGAGCCTTGATTCCGAAACTACTGCTCCTACGCTCGAATTCCGCTTCGGCACGACGTGGCAGTACACGCAGGTCGATAATCCCGATTCCAATGCGTATATCTGGAAGCCCGTGGAGAATTTCCTCTACGACGGGCAGCCAACCGACATTTATAAGGCCGACGATCCGGTGGTCAAGGACAGCAACGGCAATTTTGTGCGTATGCACAACGGCAAGGGGTTCTACGAGCCTATTCACTTTGTCTTTGAAGACACCTTCGGCCCGGGCGTTGAGCACACCATGCAATACGACGTCTATTTGCCGTACAACGCTGACTGGGGCGGCATGACTTTTGGCACCGGGTCCACGGGCGACACACACGGCGGATCGATCGGCGCGAAGGCGAACGGTATGACTGTGCCGATCGCTGCGAGCATGGATGTACGCTACGTCCTCGACTCCGAGTATCGTGCAGCTCGTGGTTTTCCTCAGGCATCCAGCAGCCCGACCGATGAATCCCAGTCGGCAGGTCTTCCGAACGAAATTGCCGGCAAAGACGAAGTATTGAAGAACCAGTATACGGCACGCCCACAAGCCGGATGGGGTGGCCAATTCGAGGGCTCAACCTACACAACGCTTGACTGCCTTGAAGGTCAGCAGCTTACCGAGCTTGCCAATTCAGTGCCGATCAACAAGATTTACCCGAACCTGAATTCTGACGCGGCTGTTCCGCTCGAGGCAGCGCCGGGTACTGCGTTCTTCGCACGATATCCCTACCAGTATTACCTCACCGGCGGACGGACGTGGGATTCCCTTTCGGGGCAAAGGTACATGAATCTCAATTCTGAGACAGGGGAATTTGAGCCATTCACCGATAAAGATGGTAATCAGCTTGTTTTCCCATATAGGCCGACGCCGCAGTCCCTCATTGCCGACATTCCGGGATACAAGTATGTCGGCTTCGACCTGCCGACGATGAAAGACGGCGCATATAAGGGCCTGACCAGTAAAGGTTATCCTGAATACCAGGACGGCCCGAACGTGGCGTCCAGATATCACAAGTCGAATGAAAAGACTCAGCACTTCTACTACACCTATGAGAAGATCAAGGGAGCCTTCAACTTGTCGAAGGTGAGCACGCTCGATAAGACTCCCATTGCCGGAGCTGAGTTTGAGCTCTACCAGGTTATCGATCCCACGGTCAGTGCCTGCGGCGTGCAACCGGATCTGACCGATACGAGTACGGTGAATATCTGCCCGCTCAAGAACGGCGCTGAAAACACTGCCCCCGAGTGCAGCAAGACGGTTCGCCGCATCACTTTGGACAACATGACTGATGGCAAGATCATCACTGACGCTGAGGGCGCTTATGCGGCACCTGAACAGTCACTGGCGTCTGATGCCACCTACCTGCTCAAGGAGGTCGCTGTTCCCGATCCCTACCGCATCGACAACGCGTGGACGCAGTTCAATGTTCCGTTGCAGACATCTGACGACCAGACT
PROTEIN sequence
Length: 599
MKSHFTVRARKVAALLGASIVAATAFVVPVQQSSQAAERPFPSYELSYQRIVGQKDPNFNPETDEGDGCIHSANPELAPLPFFGFESAAINQCDGMRVKVRWFYDKSLDSETTAPTLEFRFGTTWQYTQVDNPDSNAYIWKPVENFLYDGQPTDIYKADDPVVKDSNGNFVRMHNGKGFYEPIHFVFEDTFGPGVEHTMQYDVYLPYNADWGGMTFGTGSTGDTHGGSIGAKANGMTVPIAASMDVRYVLDSEYRAARGFPQASSSPTDESQSAGLPNEIAGKDEVLKNQYTARPQAGWGGQFEGSTYTTLDCLEGQQLTELANSVPINKIYPNLNSDAAVPLEAAPGTAFFARYPYQYYLTGGRTWDSLSGQRYMNLNSETGEFEPFTDKDGNQLVFPYRPTPQSLIADIPGYKYVGFDLPTMKDGAYKGLTSKGYPEYQDGPNVASRYHKSNEKTQHFYYTYEKIKGAFNLSKVSTLDKTPIAGAEFELYQVIDPTVSACGVQPDLTDTSTVNICPLKNGAENTAPECSKTVRRITLDNMTDGKIITDAEGAYAAPEQSLASDATYLLKEVAVPDPYRIDNAWTQFNVPLQTSDDQT