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NECEvent2014_5_2_scaffold_2191_1

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: 2..688

Top 3 Functional Annotations

Value Algorithm Source
transcription termination factor Rho n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B38CB6 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 228.0
  • Bit_score: 419
  • Evalue 2.00e-114
Transcription termination factor Rho {ECO:0000313|EMBL:EFW08701.1}; Flags: Fragment;; TaxID=888051 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomy similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 228.0
  • Bit_score: 418
  • Evalue 4.80e-114
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 227.0
  • Bit_score: 382
  • Evalue 1.00e-103

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Taxonomy

Actinomyces sp. oral taxon 178 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 687
GTCAATAACCCTGAGGTTCACCTCATGGTCGTCCTGGTTGACGAGCGTCCTGAAGAAGTCACCGACATGCGCTCCATTGTCAAGGGTGAAGTCATCGCCTCCACGTTCGACCGCCCCGCTTCCGACCACACCACGGTTGCCGAACTTGCCATTGAGCGAGCCAAGCGCCTGGTCGAGCTGGGACAGGACGTTGTCGTGCTGCTCGATTCACTCACGCGCCTGTCACGCGCCTACAACCTGGCGGCACCGGCGTCAGGTCGTATCCTCTCCGGTGGTGTGGACGCTTCCGCGCTGTACCCGCCCAAGAAGTTCTTCGGCGCAGCCCGCAACCTCAAGGAAGGCGGCTCACTGACCATCGTGGCCTCTGCCTTGGTGGAGACCGGGTCCAAGATGGACGAAGTCATCTTTGAAGAGTTCAAGGGCACCGGCAACATGGAACTGCGCCTGTCGCGCGCGCTGGCAGATCGTCGAATCTTCCCGGCCATCGATGTCAACGCCTCGGGCACTCGTCGCGAGGAAGTCCTGTTCAAGCCTGAAGAGCTGCGCATCATGTGGAAGCTGCGCCGCGTCCTCGGATCCCTTGAGCAACAGCAGGCACTGGAAGTGGTTCTGGACAAACTCAAGGAAACCCAGTCCAATGCTGAGTTCCTCATGCTGATCCAGAAGACCACGCCGAACGCTGACTAG
PROTEIN sequence
Length: 229
VNNPEVHLMVVLVDERPEEVTDMRSIVKGEVIASTFDRPASDHTTVAELAIERAKRLVELGQDVVVLLDSLTRLSRAYNLAAPASGRILSGGVDASALYPPKKFFGAARNLKEGGSLTIVASALVETGSKMDEVIFEEFKGTGNMELRLSRALADRRIFPAIDVNASGTRREEVLFKPEELRIMWKLRRVLGSLEQQQALEVVLDKLKETQSNAEFLMLIQKTTPNAD*