ggKbase home page

NECEvent2014_5_2_scaffold_5319_2

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: comp(492..1274)

Top 3 Functional Annotations

Value Algorithm Source
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 260.0
  • Bit_score: 435
  • Evalue 7.40e-119
glycine hydroxymethyltransferase (EC:2.1.2.1) similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 260.0
  • Bit_score: 395
  • Evalue 1.30e-107
serine hydroxymethyltransferase n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B32810 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 260.0
  • Bit_score: 443
  • Evalue 1.50e-121
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinomyces sp. ICM47 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 783
CGTGTGATCATTGCCGGATGGTCGGCCTACCCTCGTCACCTTGACTTTGCTGCTTTCCGCAGCATTGCCGACGAGGTTGGCGCTGCGCTGTGGGTTGACATGGCGCACTTTGCCGGCCTCGTTGCAGCCGGACTGCACCCAAGCCCACTGCCCCACGCCGACGTGGTGACCACGACGGTCCACAAGACACTGGGGGGTCCCCGCTCCGGCATGATCTTGTCCGCGCGCGGCGAGCAGTGGGGCAAGAAGCTGAATTCTGCTGTGTTCCCAGGTCAGCAGGGTGGCCCGCTGATGCATGTGGTGGCAGCGAAGGCTGTCGCAATGAAAGTGGCTCAGACCCCGGAGTTCAAGGATCGTCAGGTCAGAACTCTTGCCGGCGCGCAGAAACTTGCGGAGCGTCTGGGACGCGACGATGCGAAGAAGGTCGGCATCAAGCTGGTCACCGGCGGCACAGATGTGCACCTGGTGCTCGTTGACCTGGTTGATTCAGCTCTTGACGGCAAGCAGGCTGAGGATCTGCTGCACGGAGTCGGCATCACGGTCAATCGCAATGCTGTGCCGTTTGACCCGCGCCCACCGGCAGTCACATCCGGTCTGCGTATCGGAACGCCGGCGCTGGCTACGCGCGGTTTTCGCGATGAGGAGTTCACCGAAGTTGCCGACATCATCGCGACCGCATTGGTTCAGGCGGCCTCCAAGGAAACAGTGGATATGGAGGGTCTGCAGGCGCGCGTGCGTGCACTGACCGATGCCTTCCCGTTGTACGACGGGCTGCAGCAGTGA
PROTEIN sequence
Length: 261
RVIIAGWSAYPRHLDFAAFRSIADEVGAALWVDMAHFAGLVAAGLHPSPLPHADVVTTTVHKTLGGPRSGMILSARGEQWGKKLNSAVFPGQQGGPLMHVVAAKAVAMKVAQTPEFKDRQVRTLAGAQKLAERLGRDDAKKVGIKLVTGGTDVHLVLVDLVDSALDGKQAEDLLHGVGITVNRNAVPFDPRPPAVTSGLRIGTPALATRGFRDEEFTEVADIIATALVQAASKETVDMEGLQARVRALTDAFPLYDGLQQ*