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NECEvent2014_5_2_scaffold_5483_1

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: comp(2..631)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 211.0
  • Bit_score: 225
  • Evalue 7.20e-56
tRNA pseudouridine synthase A (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 205.0
  • Bit_score: 222
  • Evalue 9.30e-56
tRNA pseudouridine synthase A n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X520_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 211.0
  • Bit_score: 225
  • Evalue 5.10e-56

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Taxonomy

Actinomyces cardiffensis → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
ATGGACACTGTGAGGGCGCGGCTTGACCTGGCATACGACGGCACCTTCTTCCACGGCTGGGCCGCACAGCCCGGACTACGCACCGTGGAAGGTGAACTGGTTCGAGCCCTGTCGCTGATCGCCCGCCAGGAAGTGGCGGTGACTGTGGCGGGACGCACCGATGCGGGAGTGCACGCAGATCATCAGGTGGCTCACGTCGACCTGCCGGCGCAGGTGTGGGACAGCCTTCCGGGAAGGTCCTCGCGCACACCCGAAGATGCGCTGGTTGACCGTCTGGCCTCTCTGCTTACCCGCGCGCACGGTGATTTCATGAAGGCGCACGGGCTGATGTCGCCGAGAGGGTACTGCGACGTTGCGCTTCTGAGTTCTCATCGCGTGCCGGAAACCTTCGATGCGCGTTTCAGCGCTGTGGGGCGTCACTATGTGTACCGGCTGCTTGACCAGCGCGCGGGCAGTGACCCCTTTTCCGGGCGACGCATCTGGACGGTTCCTGCACGCCAGACGCTTAATTTGGAAGCCATGGCTGAAGCTGCTTCCAGCGTCATCGGTGAGCATGATTTTCTGTCCTTTTGCAAGCCGCGTGAGGGCGCGACCACGATCCGTACGCTCCGCCAGCTGGACGTCGTGGCG
PROTEIN sequence
Length: 210
MDTVRARLDLAYDGTFFHGWAAQPGLRTVEGELVRALSLIARQEVAVTVAGRTDAGVHADHQVAHVDLPAQVWDSLPGRSSRTPEDALVDRLASLLTRAHGDFMKAHGLMSPRGYCDVALLSSHRVPETFDARFSAVGRHYVYRLLDQRAGSDPFSGRRIWTVPARQTLNLEAMAEAASSVIGEHDFLSFCKPREGATTIRTLRQLDVVA