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NECEvent2014_5_2_scaffold_5175_2

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: comp(601..1299)

Top 3 Functional Annotations

Value Algorithm Source
GTP-binding protein TypA n=1 Tax=Atopobium sp. ICM58 RepID=J3EL97_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 232.0
  • Bit_score: 418
  • Evalue 4.50e-114
GTP-binding protein TypA {ECO:0000313|EMBL:EJN53090.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 232.0
  • Bit_score: 418
  • Evalue 6.40e-114
GTP-binding protein TypA similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 232.0
  • Bit_score: 363
  • Evalue 3.70e-98

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Taxonomy

Atopobium sp. ICM58 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
GGGTTTGAGCTTACTGTCGGTAAACCACAGGTTGTGACCAAGGAAATTGACGGTAAAGTTCACGAGCCGATGGAGCAGATGACCATCGACATTCCTGAGGAGTATCTGGGCGCGGTGACCCAGCTGATGGCTCAGCGTAAAGGCCGCATGAACTCGATGGCTAATCACGGGAGTGGTTGGATCCGCCTCCAGTTCACGATCCCTGCCCGCGGGCTGATTGGCTTCCGTGCGCGTTTCTTGACTGAAACTCGTGGAACGGGAATCGCCTCGTCAATTTCGGAGGGATACGCTCCGTGGCAGGGGACGATTGAGCAGCGGCTGACCGGCTCCTTGGTTGCTGACCGTGCAGGGCAGGCAACGCCTTACGCGATGACCAACCTGCAGGAGCGCGCATCGTTCATTATTGAGCCGGGGTCAGAGGTTTATGAAGGTCAGGTTGTAGGGGAGAATCCCCGTAACGAGGATATGGACGTCAATATCACGCGTGAGAAGAAGCAGACGAATACGCGTTCGGCCACCGCTGATGTGTATGAAACGTTGACTCCGTCGCGAAAACTGACGCTGGAAGAGTCGCTGGAGTTCGCGTCTAATGATGAATGTGTTGAGGTCACGCCTGAGGCGATTCGTATTCGTAAGGTCGTGTTGGATTCGCAGGAGCGTTTTAAGATCGCAGCGCGTCAACGTCGTAAAGATAAGTAG
PROTEIN sequence
Length: 233
GFELTVGKPQVVTKEIDGKVHEPMEQMTIDIPEEYLGAVTQLMAQRKGRMNSMANHGSGWIRLQFTIPARGLIGFRARFLTETRGTGIASSISEGYAPWQGTIEQRLTGSLVADRAGQATPYAMTNLQERASFIIEPGSEVYEGQVVGENPRNEDMDVNITREKKQTNTRSATADVYETLTPSRKLTLEESLEFASNDECVEVTPEAIRIRKVVLDSQERFKIAARQRRKDK*