ggKbase home page

NECEvent2014_5_2_scaffold_5747_1

Organism: NECEvent2014_5_2_Actinomyces_60_7

partial RP 47 / 55 MC: 5 BSCG 40 / 51 ASCG 12 / 38 MC: 2
Location: 2..1198

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 399.0
  • Bit_score: 679
  • Evalue 2.60e-192
rpoC; DNA-directed RNA polymerase (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 400.0
  • Bit_score: 531
  • Evalue 2.30e-148
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Actinomyces sp. ph3 RepID=UPI000302A139 similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 399.0
  • Bit_score: 675
  • Evalue 3.50e-191

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinomyces sp. S6-Spd3 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1197
ATGGCGTTTGATCGTGGCGAACTGGATCTGAATGCCCGTGCACGGATCCGCTTCACCGACATTGTGCCGCCCAAGGGCTGGGAAGTCCCGGAGAACTGGGAAGAGGGCGATCCGATCCTGCTGGAAACCTCGCTGGGGCGCGCGATCTTCAACGAGACTCTGCCGGTCGACTACCCGTTCGTCAACTACGTTGTGGGTAAGAAGCAGCTGGGAACGATCGTTAACACATTGACGGAGCGTTACCCGAACGTCCTCGTCGCCGAATCTCTGGACGCACTGAAAGCTGCCGGTTTCCACTGGTCAACTTGGTCTGGCATCACAATCGCGTTCTCTGACATTCAAGCGTCAGACCGCAAGGAAGAAATCCTGGCGCGTTACGAAGCCAAAGCTGCGGAGATTCAGGACCAGTTCGACACCGGTATCATCCTGGAAGAAACCCGGTACGAGGAACTGGTCAAGCTGTGGCTGAAGTGCACTGAGGAAGTTGCTGACGACATGCGTCAGAACTTCGATGCGCGCAACACCGTCTACCGCATGGTGTCGTCGGGTGCTCGTGGTAACTGGAGCCAGGTCCAGCAGATCGCCGGTATGCGTGGCCTGGTGTCTGACCCGAAGCAGAAGCTCATTGAGCGTCCGATTAAGGCAAACTACCGTGAAGGCCTGACGGTTCTGGAGTACTTCATCGCAACTCACGGCGCTCGTAAGGGTCTGGCTGATACCGCTCTTCGTACCGCCGAATCTGGTTACCTGACCCGCCGTCTGGTCGACGTGTCGCAGGACGTGATTGTGCGTGAAGAGGACTGCGGTACCCGCGCCGGCATTCGCGTGCCGATCGCCCGCAAGAACGAGTTTGACGAGTGGGAAGCCGTTGAAGCGGTTGAGACTACTGCGTACGCCCGTACGCTTGCCCGCGATGCGGTGGGTGAAGATGGCACTGTCGTGGCGGAGGCTGGCACCGACATTGGTGATGACCTGATTGCTCAGATGGTTGCCGCCGGTGTGACCGAGGTGACGACCCGTTCCGTGCTGACCTGTGAGTCGGCGGTGGGCGTGTGCGCCAGCTGCTACGGCCGTTCGCTGGCCACCGGTAAGCGCGTCTCGATCGGTGAAGCTGTCGGTATTATCGCAGCTCAGTCGATTGGTGAGCCTGGTACCCAGCTGACGATGCGTACCTTCCACACCGGTGGTGTCGCTGGT
PROTEIN sequence
Length: 399
MAFDRGELDLNARARIRFTDIVPPKGWEVPENWEEGDPILLETSLGRAIFNETLPVDYPFVNYVVGKKQLGTIVNTLTERYPNVLVAESLDALKAAGFHWSTWSGITIAFSDIQASDRKEEILARYEAKAAEIQDQFDTGIILEETRYEELVKLWLKCTEEVADDMRQNFDARNTVYRMVSSGARGNWSQVQQIAGMRGLVSDPKQKLIERPIKANYREGLTVLEYFIATHGARKGLADTALRTAESGYLTRRLVDVSQDVIVREEDCGTRAGIRVPIARKNEFDEWEAVEAVETTAYARTLARDAVGEDGTVVAEAGTDIGDDLIAQMVAAGVTEVTTRSVLTCESAVGVCASCYGRSLATGKRVSIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAG