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NECEvent2014_5_2_scaffold_2707_2

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 1176..1595

Top 3 Functional Annotations

Value Algorithm Source
Transport protein ExbD n=129 Tax=Pseudomonas RepID=A6VAS2_PSEA7 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 260
  • Evalue 1.20e-66
biopolymer transporter ExbD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 260
  • Evalue 3.50e-67
Transport protein ExbD {ECO:0000313|EMBL:AAG04083.1}; TaxID=208964 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugin similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 260
  • Evalue 1.70e-66

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGGCTTCCGTGAACAGCAGCCACGACGATGACGACGACGGCGCCGTCGACAGCATCAACATCACCCCGCTGGTGGACGTGCTGATGGTGGTGCTGGTGATGTTCATCCTCACCGCCACCGCCCAGGTCGCCGGGATCCAGATCAACCTGCCGAAGGCCAGTGCCACCGTGGCGCTGTCGCAGCCCAAGACCAAGGCGATCTCGGTGAACGACGCCGGCCAGGTGTTCCTCGACGCCTACCCGGTGACCCTGCCCGAGCTGGAGGACCGCCTGCGTACGGAGAAGGCCCTCAACCCCGACTTCCCGGTAGTGGTCCGCGGCGACGCCACGGTGCAGTACCAGAAGGTTATCGAGGTCCTCGACCTGCTGCGCCGCCTGGAGCTGTCCCAGGTCGGCCTGGTCACCGGCAAACCGACCTGA
PROTEIN sequence
Length: 140
MASVNSSHDDDDDGAVDSINITPLVDVLMVVLVMFILTATAQVAGIQINLPKASATVALSQPKTKAISVNDAGQVFLDAYPVTLPELEDRLRTEKALNPDFPVVVRGDATVQYQKVIEVLDLLRRLELSQVGLVTGKPT*