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NECEvent2014_5_2_scaffold_2292_4

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 1070..1585

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 factor, ECF subfamily n=11 Tax=Pseudomonas aeruginosa RepID=K1BVS0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 337
  • Evalue 5.80e-90
  • rbh
RNA polymerase ECF-subfamily sigma-70 factor {ECO:0000313|EMBL:ETU95966.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 171.0
  • Bit_score: 336
  • Evalue 2.30e-89
putative sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 171.0
  • Bit_score: 334
  • Evalue 1.40e-89
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGGATGCGCCGTTGGCGGAGCAGGATCTCAAGGCACTGTTTCTCAGGCATGCCCGGCAGTTGCAGTCGTATCTGTTGCGCAAGACCCGCGATCCGCACCTGGCGGCGGACCTTGCGCAGGAGAGCTTCCTGCGCCTGACCGAGCAGCGGCACAAGGAGCCGATCGAGCATGTCGACGCCTATCTCTACCGCACCGCGCACAACCTCACCATCGACCATTACCGGCAGGAACGGCGGCGCCGCACCGAGACCCGGCCCAACGACGACCTCGCCGGGTTCGTCGCCGACCAGCCCGGCCCCGAGGAGTCCGCGGTGGATGCCGATGCGCTTGCCCGCCTGCGCGAGATAGTCGCCGAACTGCCGCCGCGCACCCGTGAGATCTTCCGTCTCAACCGTCTGGAGGGGCTGACCCATGCCGAGGTGGCGAGACGCCTGGAAATCTCCGATAGCTCGGTGCAGAAGCACCTGGCCCGCGCCCTGGCCCATGTGATGCAGGCACTCGAGGATTCCCGCTGA
PROTEIN sequence
Length: 172
VDAPLAEQDLKALFLRHARQLQSYLLRKTRDPHLAADLAQESFLRLTEQRHKEPIEHVDAYLYRTAHNLTIDHYRQERRRRTETRPNDDLAGFVADQPGPEESAVDADALARLREIVAELPPRTREIFRLNRLEGLTHAEVARRLEISDSSVQKHLARALAHVMQALEDSR*