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NECEvent2014_5_2_scaffold_2319_3

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(1833..2339)

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=75 Tax=Pseudomonas RepID=R9ZA45_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 168.0
  • Bit_score: 328
  • Evalue 4.50e-87
  • rbh
RND transporter similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 329
  • Evalue 5.70e-88
Resistance-Nodulation-cell Division (RND) efflux membrane fusion protein {ECO:0000313|EMBL:AHW68656.1}; TaxID=1457392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomon similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 329
  • Evalue 2.80e-87

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGTTCAACGTCTACGAGTCGTTGTTCAGCCACGATGTCGACGGCCAGCGGATCACCGTCAGCCTGCTCGGCAAGCCGGAAGTCACCGCCAGCGGCAAGGTCCGCGAGATCACCCCGACGGTGGACGAGCGCAGCGGTACGCTGAAGGTCAAGGTCGGCCTCGACTCGGTGCCGGCGGAAATGAGCCTCGGCAGCGTGGTCAACGCCAGCGTCGCCGCGCCGGCCGAGCACAGCGTGGTGCTGCCCTGGTCGGCGCTGTCCAAGGTCGGCGAGCAGCCGGCGGTCTGGTTGCTCGACCAGCAAGGCAAGGCGCGTCTGCAACCGGTGCGGGTGGCACGCTACGCCAGCGAGAAGGTGGTCATCGACGGTGGCCTGGAGGCGGGCCAGACGGTGGTCACGGTGGGCGGTCAACTGCTCCATCCGGGCCAGGTGGTCGAGGTGGCCCAGCCGCCGCAGCCGACCCAGAGCACCGCCAGCCGCGACGCCGTGGGCGGAGGCCAGCCATGA
PROTEIN sequence
Length: 169
VFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVGLDSVPAEMSLGSVVNASVAAPAEHSVVLPWSALSKVGEQPAVWLLDQQGKARLQPVRVARYASEKVVIDGGLEAGQTVVTVGGQLLHPGQVVEVAQPPQPTQSTASRDAVGGGQP*