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NECEvent2014_5_2_scaffold_2459_3

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(1258..2235)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=3 Tax=Pseudomonas aeruginosa RepID=V5SNT3_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 305.0
  • Bit_score: 594
  • Evalue 5.00e-167
  • rbh
Pseudomonas aeruginosa genome assembly PAE221 {ECO:0000313|EMBL:CEI75469.1}; Uncharacterized protein {ECO:0000313|EMBL:CEH97808.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Ps similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 325.0
  • Bit_score: 635
  • Evalue 4.60e-179
pcaQ; transcriptional regulator PcaQ similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 325.0
  • Bit_score: 631
  • Evalue 1.30e-178
  • rbh

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 978
CTCGTTCCCAACCCGCCCGTTGGGTACCATGCCCGCACCACTCGCCGCCACGGCCGCCCCATGAACCTCGACAACCGCATCAAGTTCCGCCACCTCGCCTGCTTCCTCGAAGTCGCCCGCCAGCGCAGCTTCGCCAAGGCGGCGGATGCCGTGGCGGTGTCGCAGCCGGCGATCTCCAAGACCCTCAAGGAACTGGAGGAAATCCTCGGCGCGCGCCTGTTCGAACGGAGCAAGGCCGGCGCCGAGCTGACCGAGGCGGGCGTGACCTTCCTGCGCTATGCCGGCCCCTGCGTGCAGGCCCTGCGCGACGGGGTGAACACCCTGCGCGGCCACGAGGCGCAGGTCGAGACGGTGCGGGTCGGCGTGCTGTCGACGGTGGAGAGCCTGGTGGTGCCCGAGGTGATCCGGCGCCTGCACCGGCGCCACGGTGCGCTGGTGGTCAGCGTCGCCACCGGACCCAGCGCCTACCTGCTGGCGCAACTGAAGGTCGGCGAGCTGGACCTGGTGGTCGGGCGGATGACCGATAGCCCGGACATCCAGGGCCTGACCTTCGAGCACCTGTACAGCGAGTCGATGATGCTGGTGGTGCGTCCCGGCCACCCCTTGCTCGCCGCGCCCCTCGGCGACCCGCAGCGGCTGGCCGAATTCCCGCTGGTGCTGCCGCTGGCCGGCACCACCATCCGCCGCCACGCCGACAGCCTGTTCGTGCAATGGGGCATCGCGCTCGCCGGACAGCGCCTGGAAACCCTCTCGCCGACCCTCAGCCGCAGCTATGTGTTGCGCAGCGAGGCGATCTGGGTGGCGCCGCGCGATGCCGTGCGCCTGGACGTCGGCAACGGCGAGCTGGCCGAGCTGGACCTGGGTATCCGCGAACCGGGCGGTTCGGTCGGGCTGTGCCACAACGCGGCCTTGCCGTTGCCGCTGGGGGCGCAATGGTTCAGCGCGGTGTTGCGCGAGGTGGCCGCCGAGTTGCACTGA
PROTEIN sequence
Length: 326
LVPNPPVGYHARTTRRHGRPMNLDNRIKFRHLACFLEVARQRSFAKAADAVAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAGPCVQALRDGVNTLRGHEAQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLLAAPLGDPQRLAEFPLVLPLAGTTIRRHADSLFVQWGIALAGQRLETLSPTLSRSYVLRSEAIWVAPRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH*