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NECEvent2014_5_2_scaffold_3447_3

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(1514..1756)

Top 3 Functional Annotations

Value Algorithm Source
TIGR03750 family conjugative transfer region protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8VCD5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 80.0
  • Bit_score: 166
  • Evalue 8.30e-39
Conjugal transfer protein {ECO:0000313|EMBL:ESR01133.1}; TaxID=1263865 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chl similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 80.0
  • Bit_score: 165
  • Evalue 2.60e-38
conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 80.0
  • Bit_score: 164
  • Evalue 1.20e-38

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Taxonomy

Pseudomonas chloritidismutans → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 243
ACGCACAGCATCGCCATGGTGCCGACGCTGATCGTCGCCGGTATCGCGCTGGGCGTCTTCGTCGGCGGTGGTTTTCTGCGCGCACAGAAGCGCGGCCGGCCCGACACCTGGCTCTACCGACAGCTCCAGTGGCGGCTGGCCCTGCGGCACCCGGCGCTGGCAGCGCTCCTGGGCGGGCAGCGCCTCATCACCCGCTCGGGCTACTGGACGACCCGGCGCAACGCCGATCGAGGTTCGCCATGA
PROTEIN sequence
Length: 81
THSIAMVPTLIVAGIALGVFVGGGFLRAQKRGRPDTWLYRQLQWRLALRHPALAALLGGQRLITRSGYWTTRRNADRGSP*