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NECEvent2014_5_2_scaffold_1955_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 2..1960

Top 3 Functional Annotations

Value Algorithm Source
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC n=24 Tax=Pseudomonas RepID=MNMC_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 608.0
  • Bit_score: 1230
  • Evalue 0.0
  • rbh
5-methylaminomethyl-2-thiouridine-forming enzyme mnmC similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 608.0
  • Bit_score: 1230
  • Evalue 0.0
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_011 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 608.0
  • Bit_score: 1230
  • Evalue 0.0

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1959
CTGGCGCACTATGCGGAGATCATCGACGTGCTGAGCGCCATCGGAGCGGCGGGCGGGGCCATCGCGAAGATCACCGTCACCACGGCCGACGACCAGCTGGCGCGCATCATCGAACCGCACGCGCCCTCGCCTAGCGAGCGCTTCGCCGCGCTGGGCGACGGCGAGGTGCTGTGTATCGGCGAGACCGGCTTCGGCACCGGACTGAACTTCCTCTGCGCCTGGCAGCTGTTCGAGCGGGTCGCGCCGGCCGGCGCGCGCCTGGAGTTCGTCAGCGTGGAGAAATTCCCCCTCGCCGCCGCCGACCTGCGCCGCGCCCTGGCGCTATGGCCGGAACTGGCGCCCTGGAGCGAGGCCCTGCTGGGCCAGTACCTTGCCGTGCACCCGGGCTTCCAGCGCCTGGCGTTCGCGGGCGGAAGGGTCGGCCTGACCCTGCTGCTGGGCGATGCCCTGGAGTGCCTGCCGCAGCTCGACGCGCGGGTCGACGCCTGGTTCCTCGATGGCTTCGCCCCGGCGAAGAACCCGGACATGTGGTCGCCCGTACTGTTCGCCGAACTGGCGCGACTGTCGGCGCCGCAGGCGACCCTGGGCACCTTCACCAGCGCCGGTTTCGTCCGCCGCGGGCTGGTCGAGGCCGGTTTCGCCATGCAACGGGTACCGGGCTACGGACAGAAGCGCGAGATGCTCAGCGGCACCTACCAGGGGCCGCCGGCGAACGCCGGCAAGCCCTGGTACGCACGCCCCGCGCCCCACGCCGGGCGCCGCGCGGCACTGGTGGTCGGCGGCGGCCTGGCCGGCTGCGCCAGCGCCGCCAGCCTCGCCGCGCGCGGCTGGCAGGTGACCCTGATCGAACGCCATCCCGGCCTCGCCCGGGAAGCCTCGGGCAACCCCCAGGGCGTGCTCTACCTGAAACTCTCGGCCCACGGCACGCCGCTGTCGCGCCTGGTGCTCAGCGGCTTCGGCCATACCCGCCGGCTGCTCGAACGCCTGCGGCGCGGCCACGACTGGGACGCCTGCGGCGTACTGCAACTGGCCTTCGACGCCAAGGAAGCGCAACGCCAGGCGCAACTGGCCGCAGCCTTCCCCGCCGACCTGCTGCACGGCCTGGAGCGCGAGCAGGCCGAGCGCCTCGCCGGCGTCGCCCTGCCCGCCGGCGGCCTGTTCTATCCCGAAGCCGGCTGGGTCCATCCGCCCGCGCTGTGCCAGGCCCTGGCCGCCACCCCCGGGATCACCCTGCTGAGCGGCCGGGCAGTACGCTTGCGCCGCGAGGGCGACGACTGGTGCGCCTACGCCGGCGACGAATGCCTGGCCCGCGCGCCACTCGCGATCCTCGCCACCGCCGCCGACATCCGCGACTTCCCGCCCGCCGCCGAGCTGCCGCTGAAGCGCATTCGCGGGCAGGTCACCCGCCTGCCGGCCACCCCGCAAAGCCGGGCGCTGCGCACCGTGGTCTGCGCCGAGGGCTACGTCGCACCGCCGCGTGGCGACGAACACACCCTCGGCGCCAGCTTCGACTTCAAGAGCGAAGACCTGGCGCCGACCCTCGCCGAACACCAGGGCAACCTCGAACTGCTGCGGGAAATATCCCCCGACCTGTTGCAGCGCCTGGGCGCCGACGACCTGCCGCTGGAGCGCCTGGAAGGCCGCGCGGCATTCCGCTGCACCAGCCCCGACTACCTGCCCCTGGTAGGCCCGCTGGCCGAGCGCGCGGCCTTCGACGAGGCCTACGCGGTGCTCGCCCGCGACGCCCGCCAGGTGCCGGAGCGTGCCTGCCCCTGGCTGCCAGGCCTGTACCTGAACAGCGGCCACGGCTCGCGCGGGCTGATCAGTGCGCCGCTGTCCGGCGAACTGCTGGCGGCGTGGATCTGCGGCGAGCCGCTGCCGCTGCCGCGCGCGGTGGCCGAGGCCTGCCACCCGAACCGCTTCCTGCTGCGCGACCTGGTGCGCGGGCAGCGCGGCTGA
PROTEIN sequence
Length: 653
LAHYAEIIDVLSAIGAAGGAIAKITVTTADDQLARIIEPHAPSPSERFAALGDGEVLCIGETGFGTGLNFLCAWQLFERVAPAGARLEFVSVEKFPLAAADLRRALALWPELAPWSEALLGQYLAVHPGFQRLAFAGGRVGLTLLLGDALECLPQLDARVDAWFLDGFAPAKNPDMWSPVLFAELARLSAPQATLGTFTSAGFVRRGLVEAGFAMQRVPGYGQKREMLSGTYQGPPANAGKPWYARPAPHAGRRAALVVGGGLAGCASAASLAARGWQVTLIERHPGLAREASGNPQGVLYLKLSAHGTPLSRLVLSGFGHTRRLLERLRRGHDWDACGVLQLAFDAKEAQRQAQLAAAFPADLLHGLEREQAERLAGVALPAGGLFYPEAGWVHPPALCQALAATPGITLLSGRAVRLRREGDDWCAYAGDECLARAPLAILATAADIRDFPPAAELPLKRIRGQVTRLPATPQSRALRTVVCAEGYVAPPRGDEHTLGASFDFKSEDLAPTLAEHQGNLELLREISPDLLQRLGADDLPLERLEGRAAFRCTSPDYLPLVGPLAERAAFDEAYAVLARDARQVPERACPWLPGLYLNSGHGSRGLISAPLSGELLAAWICGEPLPLPRAVAEACHPNRFLLRDLVRGQRG*