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NECEvent2014_5_2_scaffold_1995_3

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 1846..2343

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=130 Tax=Pseudomonas RepID=SSB_PSEAE similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 165.0
  • Bit_score: 342
  • Evalue 3.00e-91
  • rbh
single-stranded DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 165.0
  • Bit_score: 342
  • Evalue 8.30e-92
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=287 species="Bacteria; Proteobacteria; Gammapr similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 165.0
  • Bit_score: 342
  • Evalue 4.10e-91

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGGCCCGTGGGGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTACATGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGACAAGCAGACCGGCCAGCAACAGGAGCGCACCGAATGGCACCGCGTGGTGTTCTTCGGCCGCCTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGCCTGCGCACCCGCAAGTGGCAGGGCCAGGACGGTCAGGATCGCTACACCACCGAGATCGTGGTCGACATCAACGGCAACATGCAGTTGCTCGGCGGCCGCCCCTCCGGCGACGATTCGCAGCGCGCCCCGCGCGAGCCCATGCAGCGCCCGCAGCAGGCCCCGCAGCAGCAGTCGCGTCCGGCCCCGCAGCAGCAACCGGTGCCGCAACCGGCCCAGGACTACGACAGCTTCGACGACGACATTCCGTTCTAA
PROTEIN sequence
Length: 166
MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPVPQPAQDYDSFDDDIPF*