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NECEvent2014_5_2_scaffold_5629_2

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 646..1221

Top 3 Functional Annotations

Value Algorithm Source
Integrating conjugative element protein PilL, PFGI-1 class n=2 Tax=Pseudomonas aeruginosa RepID=U8GQM0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 192.0
  • Bit_score: 391
  • Evalue 6.40e-106
  • rbh
IncI1 plasmid conjugative transfer protein PilL {ECO:0000313|EMBL:AEQ93529.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 192.0
  • Bit_score: 389
  • Evalue 2.60e-105
type IV B pilus protein similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 192.0
  • Bit_score: 388
  • Evalue 1.50e-105

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGACCAGGCAGTTGACCACTCTCACGCTGTGCCTGCTGCTCGCCAGCTGCACGACCCACAAGGCTGAGCCGGCCAGGCCCGCCTTCGACAGCAGCCGCAATCCAGACCTGCTCTCACCGGACCTGTACCCGAATGGCGTACAACCGGAGAAGGAGCCCGTCGTGCGCTACGGGCGCTACACCCTGGTCAGCACCCAGCCGGACGCTGGCCAGCGCGACCTGATGGCACAGATCATCGACGTGACCATCCCGTCGAGCATGAACCCGAGTGTCAAGGACGCCATGCAGTACGTGATGAGCCGCTCGGGTTACTCGCTGTGCCCGGCAGAGGCCAGTCATGTGAACATCCTCTACACCCGGCCGCTGCCGGCAGCTCAGTACAAGCTCGGCCCCATGACCCTGCGCAACACCCTCCAAGTCCTCTCCGGCCCTGCCTGGCAGGTGAAGGTCGACGAAGTGGCGCGGCAGGTCTGCTTCGTACTGCGCCCGGGCTATCAACTTCCCCCGGCGCCGAGGCCGAAACCGGTCCAGCAACTGTATGCGAAGCCCGCTGCCCCAACTCCAGCGGCGGTAGCG
PROTEIN sequence
Length: 192
MTRQLTTLTLCLLLASCTTHKAEPARPAFDSSRNPDLLSPDLYPNGVQPEKEPVVRYGRYTLVSTQPDAGQRDLMAQIIDVTIPSSMNPSVKDAMQYVMSRSGYSLCPAEASHVNILYTRPLPAAQYKLGPMTLRNTLQVLSGPAWQVKVDEVARQVCFVLRPGYQLPPAPRPKPVQQLYAKPAAPTPAAVA