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NECEvent2014_5_2_scaffold_4645_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: 1..387

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Pseudomonas aeruginosa VRFPA08 RepID=V8EKI0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 265
  • Evalue 3.60e-68
TonB-denpendent receptor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 265
  • Evalue 1.00e-68
Outer membrane protein {ECO:0000313|EMBL:ETU88924.1}; TaxID=1402581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerugi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 128.0
  • Bit_score: 265
  • Evalue 5.00e-68

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATCGGCGCCTACGCCTATATCGACGCCGAAGTGACCAAGGACGAGAACATCGCCCGTGGCAGCCGCCTGCTCAACGTGCCGAAGCACAGCGGCAGCCTGATGGGCGTCTACGAGTTTCGCGAAGGCTGGCTGCACGGCGCCGACGCCGGCGCGGCGCTCAACTATGTCGGCGAGCGCGCCGGCGACAGCAGCGACAGCGGCTTCGAACTGCCGGCCTACACCACCGTCGACCTGCTCGCGCACTATCCGCTGGCGAGCAATGCCACCCTCGGGGTGAACGTCAACAACCTCTTCGATCGTCGCTACTACGAGCGTTCCTATAACAACGTCTGGGTCGCCCCCGGCGAGCCGCGCAACCTGACCATGAGCCTGACCCTGAACTACTGA
PROTEIN sequence
Length: 129
IGAYAYIDAEVTKDENIARGSRLLNVPKHSGSLMGVYEFREGWLHGADAGAALNYVGERAGDSSDSGFELPAYTTVDLLAHYPLASNATLGVNVNNLFDRRYYERSYNNVWVAPGEPRNLTMSLTLNY*