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NECEvent2014_5_2_scaffold_3969_1

Organism: NECEvent2014_5_2_Pseudomonas_aeruginosa-rel_66_6_partial

partial RP 39 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 1
Location: comp(2..640)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=125 Tax=Pseudomonas RepID=M9S4T9_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 408
  • Evalue 4.30e-111
  • rbh
Transcriptional regulator, GntR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 408
  • Evalue 1.20e-111
Transcriptional regulator {ECO:0000313|EMBL:EZO93357.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aer similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 213.0
  • Bit_score: 408
  • Evalue 6.10e-111

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGACCGATCAGTTGCAACACATCAGGAAGCCGCCGCGCACCGGCAAGGCTGCCCGCAGCGGTACCCAGGACGAGATCGTCTACGCCCACATCTTCGACGCCATCCTCGAACAACGCCTGGCCCCCGGCACCAAGCTGAGCGAGGAGGCGCTCGGCGAGATATTCGGTGTCAGCCGCACCATCATTCGCCGCGCCCTCTCGCGCCTGGCCCACGAGCAGGTGGTGCTGTTACGGCCGAACCGCGGCGCGGTGGTCGCCAGCCCGAGCATCGACGAGGCCCGGCAGATCCTATTCGCCCGCCGCACAGTCGAGCGCGCCATCACCGAACTGGCCACCGACAACGCCACCGCCGAGCGTCTGGCCGAGTTGCGCGAGATGGTGGTGCAGGAACAATCCAGCTTCGCCCGTGGCGACCGGGGCGCCGGCATCCGCCTGTCCGGCGAGTTCCACCTGAAGCTTGCCGAGATGGCGCGCAACGCTCCTCTGGTGAGTTTCCAGCGCAGCCTGGTGTCGCAGACCTCGCTGATCATCGCCCAGTACGAAAGCGGCGGTCGCTCGCACTGCTCGTTCGACGAGCACAACGAGATCCTCGACGCCATCGAGAAGGGCGACAAGGAGCGCGCGGTGACCCTGATGATG
PROTEIN sequence
Length: 213
MTDQLQHIRKPPRTGKAARSGTQDEIVYAHIFDAILEQRLAPGTKLSEEALGEIFGVSRTIIRRALSRLAHEQVVLLRPNRGAVVASPSIDEARQILFARRTVERAITELATDNATAERLAELREMVVQEQSSFARGDRGAGIRLSGEFHLKLAEMARNAPLVSFQRSLVSQTSLIIAQYESGGRSHCSFDEHNEILDAIEKGDKERAVTLMM