ggKbase home page

NECEvent2014_5_2_scaffold_9

Alias: 175_001_scaffold_9

Search features with annotation key words

Displaying items 91-119 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_9_91
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

87244..88017
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GAX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW04792.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
RpiR family transcriptional regulator
NECEvent2014_5_2_scaffold_9_92
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88049..89932)
DNA (1884bp) protein (628aa)
Endonuclease MutS2 {ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00084246};; TaxID=471871 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
MutS domain V protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T8S5_CLOSG rbh
MutS domain-containing protein
NECEvent2014_5_2_scaffold_9_93
unknown

Not on your lists

90369..90611
DNA (243bp) protein (81aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_9_94
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90652..93702)
DNA (3051bp) protein (1017aa)
Putative helicase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRZ6_CLOP1 rbh
Helicase {ECO:0000313|EMBL:KJU72915.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DEAD/DEAH box helicase family protein
NECEvent2014_5_2_scaffold_9_95
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93769..94731)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BYN3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EOR20086.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_5_2_scaffold_9_96
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94859..98038)
DNA (3180bp) protein (1060aa)
Pullulanase, type I n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TBL5_9CLOT rbh
Alpha-dextran endo-1,6-alpha-glucosidase {ECO:0000313|EMBL:CDM69741.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium borni
amyX; alpha-dextran endo-1,6-alpha-glucosidase
NECEvent2014_5_2_scaffold_9_97
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98298..98801)
DNA (504bp) protein (168aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UV48_CLOBO
citrulline cluster-linked gene
Membrane protein {ECO:0000313|EMBL:KIL07304.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_5_2_scaffold_9_98
unknown

Not on your lists

comp(99021..99902)
DNA (882bp) protein (294aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_9_99
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100108..102396)
DNA (2289bp) protein (763aa)
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase {ECO:0000313|EMBL:CEP44910.1}; EC=3.2.1.96 {ECO:0000313|EMBL:CEP44910.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe
Uncharacterized protein n=1 Tax=Sporolactobacillus laevolacticus DSM 442 RepID=V6IYG6_9BACL rbh
mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
NECEvent2014_5_2_scaffold_9_100
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

102812..104305
DNA (1494bp) protein (498aa)
Chitinase B n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CBT0_9CLOT rbh
Chitinase B {ECO:0000313|EMBL:EOR26470.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
carbohydrate binding domain protein
NECEvent2014_5_2_scaffold_9_101
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(104367..105314)
DNA (948bp) protein (316aa)
DNA methylase N-4/N-6 domain protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MAW2_9CLOT rbh
DNA methylase N-4/N-6 domain protein {ECO:0000313|EMBL:EHI96870.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VII
DNA methylase N-4/N-6 domain protein
NECEvent2014_5_2_scaffold_9_102
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105362..105793)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI0003670D03
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES47906.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
NECEvent2014_5_2_scaffold_9_103
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105903..106523)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QMV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KHS55515.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othin
NECEvent2014_5_2_scaffold_9_104
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106545..107162)
DNA (618bp) protein (206aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUI4_CLOBO
Putative membrane protein {ECO:0000313|EMBL:EES50370.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'Bo
hypothetical protein
NECEvent2014_5_2_scaffold_9_105
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(107155..108015)
DNA (861bp) protein (287aa)
ABC transporter family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VRC7_CLOBI rbh
Sodium ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ48852.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
ABC transporter ATP-binding protein
NECEvent2014_5_2_scaffold_9_106
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(108021..108395)
DNA (375bp) protein (125aa)
GntR-family transcriptional regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0G1_9CLOT
GntR-family transcriptional regulator {ECO:0000313|EMBL:EOR20711.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagof
GntR-family transcriptional regulator
NECEvent2014_5_2_scaffold_9_107
unknown

Not on your lists

108508..108750
DNA (243bp) protein (81aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_9_108
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

108704..109297
DNA (594bp) protein (198aa)
Zinc dependent phospholipase C n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MKF8_9CLOT
zinc dependent phospholipase C
Zinc dependent phospholipase C {ECO:0000313|EMBL:AGF55286.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutyl
NECEvent2014_5_2_scaffold_9_109
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(109442..109645)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SLX2_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL51703.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_5_2_scaffold_9_110
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(109983..111491)
DNA (1509bp) protein (503aa)
IMP dehydrogenase (EC:1.1.1.205)
Inositol-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PAJ8_9FIRM rbh
Inositol-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH) (IMPD) {ECO:0000313|EMBL:CDC21338.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubact
NECEvent2014_5_2_scaffold_9_111
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(111650..112018)
DNA (369bp) protein (123aa)
membrane protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00038102A2
Membrane protein {ECO:0000313|EMBL:KEZ87736.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_5_2_scaffold_9_112
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(112074..112406)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TXL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ57605.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
NECEvent2014_5_2_scaffold_9_113
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(112669..113760)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XJC8_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY99792.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_5_2_scaffold_9_114
unknown

Not on your lists

comp(113918..114280)
DNA (363bp) protein (121aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_9_115
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(114308..116431)
DNA (2124bp) protein (708aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CEQ05985.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptos
Sensory box protein n=1 Tax=Clostridium sordellii VPI 9048 RepID=T0DTC3_CLOSO
sensory transduction histidine kinase
NECEvent2014_5_2_scaffold_9_116
unknown

Not on your lists

comp(116371..116532)
DNA (162bp) protein (54aa)

This feature has no annotations

NECEvent2014_5_2_scaffold_9_117
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(116697..117275)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IRA6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:CCY42804.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
putative hydrolase
NECEvent2014_5_2_scaffold_9_118
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

117418..117918
DNA (501bp) protein (167aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5C3X5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58326.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrog
metal-dependent phosphohydrolase HD sub domain-containing protein
NECEvent2014_5_2_scaffold_9_119
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(118351..121245)
DNA (2895bp) protein (965aa)
chitinase a1 (EC:3.2.1.14)
Endoglucanase Y n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C7P4_9PLAN rbh
Endoglucanase Y {ECO:0000313|EMBL:EDL59167.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
Displaying items 91-119 of 119 in total

View Taxonomy