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NECEvent2014_5_2_scaffold_208

Alias: 175_001_scaffold_208

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_5_2_scaffold_208_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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47..1297
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9WM86_9CLOT rbh
transporter associated domain protein
Transporter associated domain protein {ECO:0000313|EMBL:AIY84866.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_5_2_scaffold_208_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1351..1812
DNA (462bp) protein (154aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiac
tRNA-specific adenosine deaminase TadA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0A2_CLOSA
tadA; tRNA-specific adenosine deaminase TadA
NECEvent2014_5_2_scaffold_208_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1816..2583
DNA (768bp) protein (256aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=1415775
prolipoprotein diacylglyceryl transferase n=1 Tax=Clostridium botulinum RepID=UPI0002FCF31B rbh
lgt; prolipoprotein diacylglyceryl transferase
NECEvent2014_5_2_scaffold_208_trna_1
unknown

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2724..2810
DNA (87bp)
transferRNA
NECEvent2014_5_2_scaffold_208_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3233..3724)
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6FCT7_9CLOT
NECEvent2014_5_2_scaffold_208_5
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3724..4515)
DNA (792bp) protein (264aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thyA; Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QP43_9CLOT rbh
NECEvent2014_5_2_scaffold_208_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4640..6277
DNA (1638bp) protein (546aa)
dnaX; DNA polymerase III, subunit gamma and tau (EC:2.7.7.7)
Putative DNA polymerase III, gamma and tau subunit n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2L7_9CLOT rbh
Putative DNA polymerase III, gamma and tau subunit {ECO:0000313|EMBL:CDG02866.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_5_2_scaffold_208_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6344..6688
DNA (345bp) protein (115aa)
Nucleoid-associated protein CCH01_000160 n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUE5_9CLOT
Nucleoid-associated protein CCH01_000160 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
DNA-binding protein, YbaB/EbfC family
NECEvent2014_5_2_scaffold_208_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6756..7352
DNA (597bp) protein (199aa)
Recombination protein RecR n=4 Tax=Clostridium butyricum RepID=B1QY73_CLOBU rbh
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_5_2_scaffold_208_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7563..7841
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=2 Tax=Clostridium botulinum E RepID=B2V0V9_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08223.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_5_2_scaffold_208_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7861..8136
DNA (276bp) protein (92aa)
Putative Sigma-K factor processing regulatory protein BofA n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EUE0_9CLOT
Putative Sigma-K factor processing regulatory protein BofA {ECO:0000313|EMBL:CDG02860.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
bofA; pro-sigmaK processing inhibitor BofA family protein
NECEvent2014_5_2_scaffold_208_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8519..9433
DNA (915bp) protein (305aa)
ABC transporter n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BT48_9CLOT rbh
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY83476.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su
NECEvent2014_5_2_scaffold_208_12
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9433..10659
DNA (1227bp) protein (409aa)
Putative membrane protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V0V6_CLOBA rbh
ABC-2 transporter family protein
ABC-2 transporter family protein {ECO:0000313|EMBL:AIY82760.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
NECEvent2014_5_2_scaffold_208_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10812..10997
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M7L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHJ02403.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_5_2_scaffold_208_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11218..12291
DNA (1074bp) protein (358aa)
Putative phosphoserine aminotransferase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HIQ6_9CLOT rbh
Putative phosphoserine aminotransferase {ECO:0000313|EMBL:EEH99761.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2
aspartate aminotransferase
NECEvent2014_5_2_scaffold_208_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12369..13277
DNA (909bp) protein (303aa)
serA; D-3-phosphoglycerate dehydrogenase SerA (EC:1.1.1.95)
Phosphoglycerate dehydrogenase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHA5_9CLOT rbh
Phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EEH99762.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_5_2_scaffold_208_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13299..14555
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXM2_CLOSA rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45335.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_5_2_scaffold_208_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14742..16103
DNA (1362bp) protein (454aa)
methyl-accepting chemotaxis protein n=1 Tax=Clostridium sp. JC122 RepID=UPI00028A2589
methyl-accepting chemotaxis (MCP) signaling domain protein
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:AIY84019.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_5_2_scaffold_208_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16132..17247)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGT3_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:EEH98305.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
metallophosphoesterase
NECEvent2014_5_2_scaffold_208_19
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17300..17995)
DNA (696bp) protein (232aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {E
mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN (EC:3.2.2.9)
MTA/SAH nucleosidase n=1 Tax=Clostridium sp. CAG:265 RepID=R6KML0_9CLOT rbh
NECEvent2014_5_2_scaffold_208_20
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18052..18921)
DNA (870bp) protein (290aa)
Putative membrane-associated protease n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ENV1_9CLOT
Putative membrane-associated protease {ECO:0000313|EMBL:CDG02852.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
CAAX amino terminal protease
NECEvent2014_5_2_scaffold_208_21
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19069..19827
DNA (759bp) protein (253aa)
Putative UBA/THIF-type NAD/FAD binding protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F2K1_9CLOT rbh
Putative UBA/THIF-type NAD/FAD binding protein {ECO:0000313|EMBL:CDG02851.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
UBA/THIF-type NAD/FAD binding protein
Displaying 22 items

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